RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 PARVGQ9HBI0 331 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 DNAI1Q9UI46 699 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 ODF2LQ9ULJ1 636 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 EIF3DO15371 548 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC40-201ENST00000269318 GCNT3O95395 438 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 NR3C2P08235 984 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 NR2F2P24468 414 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 CCND2P30279 289 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 CNKSR2Q8WXI2 1034 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 TSC1Q92574 1164 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 PCMTD1Q96MG8 357 aaPredicted RBP18.35■□□□□ 0.53
CCDC40-201ENST00000269318 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 A1CFQ9NQ94 594 aaKnown RBP18.35■□□□□ 0.53
CCDC40-201ENST00000269318 CYP39A1Q9NYL5 469 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 SEL1LQ9UBV2 794 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 ASTN1O14525 1302 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 A0A0U1RQJ8 604 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 CETN3O15182 167 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 EPHB6O15197 1021 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 PPP1R12BO60237 982 aaPredicted RBP18.35■□□□□ 0.53
CCDC40-201ENST00000269318 ERCC3P19447 782 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 TREML2Q5T2D2 321 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 ACRBPQ8NEB7 543 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 ATRIPQ8WXE1 791 aa18.35■□□□□ 0.53
CCDC40-201ENST00000269318 INPP4AQ96PE3 977 aaPredicted RBP18.35■□□□□ 0.53
CCDC40-201ENST00000269318 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
CCDC40-201ENST00000269318 DBR1Q9UK59 544 aaKnown RBP18.35■□□□□ 0.53
CCDC40-201ENST00000269318 ZMYM2Q9UBW7 1377 aa18.34■□□□□ 0.53
CCDC40-201ENST00000269318 TESPA1A2RU30 521 aaPredicted RBP18.34■□□□□ 0.53
CCDC40-201ENST00000269318 ARHGEF35A5YM69 484 aa18.34■□□□□ 0.53
CCDC40-201ENST00000269318 CALUO43852 315 aaPredicted RBP18.34■□□□□ 0.53
CCDC40-201ENST00000269318 CCNE2O96020 404 aa18.34■□□□□ 0.53
CCDC40-201ENST00000269318 QARSP47897 775 aaKnown RBP18.34■□□□□ 0.53
CCDC40-201ENST00000269318 KCNA1Q09470 495 aa18.34■□□□□ 0.53
CCDC40-201ENST00000269318 MAPK7Q13164 816 aa18.34■□□□□ 0.53
CCDC40-201ENST00000269318 NSUN6Q8TEA1 469 aaKnown RBP18.34■□□□□ 0.53
CCDC40-201ENST00000269318 GPRASP2Q96D09 838 aa18.34■□□□□ 0.53
CCDC40-201ENST00000269318 CSADQ9Y600 493 aa18.34■□□□□ 0.53
CCDC40-201ENST00000269318 NMT1P30419 496 aaKnown RBP18.33■□□□□ 0.53
CCDC40-201ENST00000269318 HNRNPH3P31942 346 aaKnown RBP18.33■□□□□ 0.53
CCDC40-201ENST00000269318 KCNMA1Q12791 1236 aa18.33■□□□□ 0.53
CCDC40-201ENST00000269318 DAW1Q8N136 415 aa18.33■□□□□ 0.53
CCDC40-201ENST00000269318 CCDC155Q8N6L0 562 aa18.33■□□□□ 0.53
CCDC40-201ENST00000269318 L3MBTL3Q96JM7 780 aaPredicted RBP18.33■□□□□ 0.53
CCDC40-201ENST00000269318 WDR24Q96S15 920 aa18.33■□□□□ 0.53
CCDC40-201ENST00000269318 SAMM50Q9Y512 469 aa18.33■□□□□ 0.53
CCDC40-201ENST00000269318 EPN1Q9Y6I3 576 aaPredicted RBP18.33■□□□□ 0.53
CCDC40-201ENST00000269318 A0A0G2JMZ2 1700 aa18.33■□□□□ 0.53
CCDC40-201ENST00000269318 TGFB1I1O43294 461 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 RGS20O76081 388 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 NDUFA10O95299 355 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 JAK3P52333 1124 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 CDK17Q00537 523 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 KRT76Q01546 638 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 TSR1Q2NL82 804 aaKnown RBP18.33■□□□□ 0.52
CCDC40-201ENST00000269318 PADI6Q6TGC4 694 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 ZNF720Q7Z2F6 126 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 FAM207AQ9NSI2 230 aaPredicted RBP18.33■□□□□ 0.52
CCDC40-201ENST00000269318 FAM184BQ9ULE4 1060 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 REXO2Q9Y3B8 237 aaKnown RBP18.33■□□□□ 0.52
CCDC40-201ENST00000269318 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.33■□□□□ 0.52
CCDC40-201ENST00000269318 UBE4BO95155 1302 aa18.33■□□□□ 0.52
CCDC40-201ENST00000269318 MAFGO15525 162 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 SFNP31947 248 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 RARRES1P49788 294 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 GNG11P61952 73 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 PLS1Q14651 629 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 UGCGQ16739 394 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 LBX2Q6XYB7 198 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 FRMD5Q7Z6J6 570 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 ZNF397Q8NF99 534 aaPredicted RBP18.32■□□□□ 0.52
CCDC40-201ENST00000269318 SMCR8Q8TEV9 937 aaPredicted RBP18.32■□□□□ 0.52
CCDC40-201ENST00000269318 MMRN2Q9H8L6 949 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 LCTP09848 1927 aa18.32■□□□□ 0.52
CCDC40-201ENST00000269318 WDR64B1ANS9 1081 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 HIP1RO75146 1068 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 NR3C1P04150 777 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 IREB2P48200 963 aaKnown RBP18.31■□□□□ 0.52
CCDC40-201ENST00000269318 NFIL3Q16649 462 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 ZC2HC1CQ53FD0 456 aaPredicted RBP18.31■□□□□ 0.52
CCDC40-201ENST00000269318 NLRX1Q86UT6 975 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 C4orf19Q8IY42 314 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 SENP7Q9BQF6 1050 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 STRA6Q9BX79 667 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 LZTFL1Q9NQ48 299 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 PLAGL2Q9UPG8 496 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 KCNA2P16389 499 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 ARHGAP25P42331 645 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 ODR4Q5SWX8 454 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 ZNF746Q6NUN9 644 aaPredicted RBP18.31■□□□□ 0.52
CCDC40-201ENST00000269318 USP50Q70EL3 339 aaPredicted RBP18.31■□□□□ 0.52
CCDC40-201ENST00000269318 FAM178BQ8IXR5 827 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 CHST13Q8NET6 341 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 RDM1Q8NG50 284 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 BAP1Q92560 729 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 IRX2Q9BZI1 471 aaPredicted RBP18.31■□□□□ 0.52
CCDC40-201ENST00000269318 EDEM3Q9BZQ6 932 aa18.31■□□□□ 0.52
CCDC40-201ENST00000269318 ZNHIT6Q9NWK9 470 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms