RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TTLL1O95922 423 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 PRR16Q569H4 304 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 CATSPER3Q86XQ3 398 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 DHX36Q9H2U1 1008 aaKnown RBP18.48■□□□□ 0.55
RTN1-201ENST00000267484 hCG_1984214I3L0E3 225 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 TTI1O43156 1089 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 PLCG2P16885 1265 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 SCNN1DP51172 638 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 SLC12A3P55017 1021 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 ZNF713Q8N859 430 aaPredicted RBP18.47■□□□□ 0.55
RTN1-201ENST00000267484 SCFD2Q8WU76 684 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 REEP2Q9BRK0 252 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 GGA1Q9UJY5 639 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 NR2E1Q9Y466 385 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 GOLGA6L10A6NI86 522 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 ZBTB5O15062 677 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 MARSP56192 900 aaKnown RBP18.47■□□□□ 0.55
RTN1-201ENST00000267484 ZNF844Q08AG5 666 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 CHADLQ6NUI6 762 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 PEX26Q7Z412 305 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 CD302Q8IX05 232 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 TPCN2Q8NHX9 752 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 U2AF1L4Q8WU68 220 aaKnown RBP18.47■□□□□ 0.55
RTN1-201ENST00000267484 PCDHB13Q9Y5F0 798 aa18.47■□□□□ 0.55
RTN1-201ENST00000267484 GCOM1H8Y6P7 765 aaPredicted RBP18.46■□□□□ 0.55
RTN1-201ENST00000267484 MYZAPP0CAP1 466 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 POLD1P28340 1107 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 OSGEPQ9NPF4 335 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 KDM3AQ9Y4C1 1321 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 H0YGN5 161 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 GFPT2O94808 682 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 AFPP02771 609 aaKnown RBP18.46■□□□□ 0.55
RTN1-201ENST00000267484 FNTAP49354 379 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 GABPAQ06546 454 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 SEPT2Q15019 361 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 ODF2Q5BJF6 829 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 DAAM2Q86T65 1068 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 CNOT8Q9UFF9 292 aaKnown RBP18.46■□□□□ 0.55
RTN1-201ENST00000267484 NFS1Q9Y697 457 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 HMGB1P1B2RPK0 211 aaPredicted RBP18.46■□□□□ 0.55
RTN1-201ENST00000267484 GIT2Q14161 759 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 QPCTQ16769 361 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 QRICH1Q2TAL8 776 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 TRIM51Q9BSJ1 452 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 PCDHA1Q9Y5I3 950 aa18.46■□□□□ 0.55
RTN1-201ENST00000267484 XRCC5P13010 732 aaKnown RBP18.45■□□□□ 0.54
RTN1-201ENST00000267484 SPRED3Q2MJR0 410 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 HYIQ5T013 277 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 KSR1Q8IVT5 923 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 ANO3Q9BYT9 981 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 PLCB1Q9NQ66 1216 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 PGRMC1O00264 195 aaKnown RBP18.45■□□□□ 0.54
RTN1-201ENST00000267484 MCTP2Q6DN12 878 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 NOVA2Q9UNW9 492 aaKnown RBP18.45■□□□□ 0.54
RTN1-201ENST00000267484 BCS1LQ9Y276 419 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
RTN1-201ENST00000267484 IGKV6D-41A0A0C4DH26 115 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 IL1R1P14778 569 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 ABCB4P21439 1286 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 PRPF4BQ13523 1007 aaKnown RBP18.45■□□□□ 0.54
RTN1-201ENST00000267484 KNOP1Q1ED39 458 aaKnown RBP18.45■□□□□ 0.54
RTN1-201ENST00000267484 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 ARHGAP27Q6ZUM4 889 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 SUGP1Q8IWZ8 645 aaKnown RBP18.45■□□□□ 0.54
RTN1-201ENST00000267484 GCNT4Q9P109 453 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 SERPINB13Q9UIV8 391 aa18.45■□□□□ 0.54
RTN1-201ENST00000267484 DDX3XO00571 662 aaKnown RBP eCLIP18.44■□□□□ 0.54
RTN1-201ENST00000267484 ATP2C2O75185 946 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.44■□□□□ 0.54
RTN1-201ENST00000267484 ZBTB48P10074 688 aaPredicted RBP18.44■□□□□ 0.54
RTN1-201ENST00000267484 IBSPP21815 317 aaPredicted RBP18.44■□□□□ 0.54
RTN1-201ENST00000267484 SHMT1P34896 483 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 CACNB3P54284 484 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
RTN1-201ENST00000267484 USH1GQ495M9 461 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 BARGINQ6ZT62 677 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 CYP2W1Q8TAV3 490 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 KCNMB3Q9NPA1 279 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 SIX2Q9NPC8 291 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 GAKO14976 1311 aa18.44■□□□□ 0.54
RTN1-201ENST00000267484 EDRF1Q3B7T1 1238 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 FOXR2Q6PJQ5 311 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 ZFPM1Q8IX07 1006 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 CNPY4Q8N129 248 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 CYFIP2Q96F07 1278 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 GCNT3O95395 438 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 EPHA7Q15375 998 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 PRPF38AQ8NAV1 312 aaKnown RBP18.43■□□□□ 0.54
RTN1-201ENST00000267484 ACTRT1Q8TDG2 376 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 PBKQ96KB5 322 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 BHMT2Q9H2M3 363 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 FAM107AO95990 144 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 H2AFZP0C0S5 128 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
RTN1-201ENST00000267484 H2AFVQ71UI9 128 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 GLYCTKQ8IVS8 523 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 TBC1D16Q8TBP0 767 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 RUSC1Q9BVN2 902 aa18.43■□□□□ 0.54
RTN1-201ENST00000267484 NR3C1P04150 777 aa18.42■□□□□ 0.54
RTN1-201ENST00000267484 SPATA31C1P0DKV0 1188 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms