RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CEP57Q86XR8 500 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 SMC1BQ8NDV3 1235 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 MSTO1Q9BUK6 570 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 PASKQ96RG2 1323 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 P4HBP07237 508 aaKnown RBP16.71■□□□□ 0.26
TIMP3-201ENST00000266085 PRR29P0C7W0 189 aa16.71■□□□□ 0.26
TIMP3-201ENST00000266085 KIF11P52732 1056 aa16.71■□□□□ 0.26
TIMP3-201ENST00000266085 PROM2Q8N271 834 aa16.71■□□□□ 0.26
TIMP3-201ENST00000266085 HOMER3Q9NSC5 361 aa16.71■□□□□ 0.26
TIMP3-201ENST00000266085 JRKLQ9Y4A0 524 aa16.71■□□□□ 0.26
TIMP3-201ENST00000266085 NFX1Q12986 1120 aaKnown RBP16.7■□□□□ 0.26
TIMP3-201ENST00000266085 CEP55Q53EZ4 464 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 PRAMEF18Q5VWM3 479 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 PPP1R2P3Q6NXS1 205 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 C7orf31Q8N865 590 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 ATP2A3Q93084 1043 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 IQCA1LA6NCM1 817 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 FOXN1O15353 648 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 C10orf76Q5T2E6 689 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 KAZNQ674X7 775 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 VSIG1Q86XK7 387 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 POLR1AO95602 1720 aaPredicted RBP16.7■□□□□ 0.26
TIMP3-201ENST00000266085 SYNJ2BP-COX16A0A087WUM0 186 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 GIPC1O14908 333 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 CD58P19256 250 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 GBP1P32455 592 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 SLFN12LQ6IEE8 588 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 ALKBH5Q6P6C2 394 aaKnown RBP16.7■□□□□ 0.26
TIMP3-201ENST00000266085 TXNRD3Q86VQ6 643 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 BBOF1Q8ND07 529 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 COX16Q9P0S2 106 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 GABBR1Q9UBS5 961 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 RNF14Q9UBS8 474 aa16.7■□□□□ 0.26
TIMP3-201ENST00000266085 GOLGA8SH3BPF8 625 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 ANGEL2Q5VTE6 544 aaKnown RBP16.69■□□□□ 0.26
TIMP3-201ENST00000266085 SWSAP1Q6NVH7 229 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 LGALS16A8MUM7 142 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 LPXNO60711 386 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 PPFIA4O75335 1185 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 COASYQ13057 564 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 NEDD9Q14511 834 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 NEK9Q8TD19 979 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 MRPL47Q9HD33 250 aaKnown RBP16.69■□□□□ 0.26
TIMP3-201ENST00000266085 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 PGRMC1O00264 195 aaKnown RBP16.69■□□□□ 0.26
TIMP3-201ENST00000266085 PDHBP11177 359 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 ATF2P15336 505 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 PHBP35232 272 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 PPP4CP60510 307 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 COG2Q14746 738 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 LLGL1Q15334 1064 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 SURF1Q15526 300 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 C10orf67Q8IYJ2 551 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 ATP6V0A4Q9HBG4 840 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 DEPDC5O75140 1603 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 ZSCAN20P17040 1043 aaPredicted RBP16.69■□□□□ 0.26
TIMP3-201ENST00000266085 CATSPER4Q7RTX7 472 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 CCT6BQ92526 530 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 FAM167AQ96KS9 214 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 PHF20Q9BVI0 1012 aa16.69■□□□□ 0.26
TIMP3-201ENST00000266085 HGSO14964 777 aaPredicted RBP16.68■□□□□ 0.26
TIMP3-201ENST00000266085 GMPSP49915 693 aaPredicted RBP16.68■□□□□ 0.26
TIMP3-201ENST00000266085 SLC12A2P55011 1212 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 GIMAP8Q8ND71 665 aaPredicted RBP16.68■□□□□ 0.26
TIMP3-201ENST00000266085 BPIFA3Q9BQP9 254 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 TMEM39BQ9GZU3 492 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.68■□□□□ 0.26
TIMP3-201ENST00000266085 NEURL4Q96JN8 1562 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 SLC16A4O15374 487 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 NR3C1P04150 777 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 SFNP31947 248 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 STX2P32856 288 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 LMNB2Q03252 620 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 ARID5BQ14865 1188 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 XXYLT1Q8NBI6 393 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 LXNQ9BS40 222 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 RPF1Q9H9Y2 349 aaKnown RBP16.68■□□□□ 0.26
TIMP3-201ENST00000266085 MED4Q9NPJ6 270 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 GGA3Q9NZ52 723 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 I3L4J1 428 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 FTCDO95954 541 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 MAN1A1P33908 653 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 GABPAQ06546 454 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 MAPK6Q16659 721 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 ANKRD42Q8N9B4 389 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 LPAR1Q92633 364 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 FBXO2Q9UK22 296 aaPredicted RBP16.68■□□□□ 0.26
TIMP3-201ENST00000266085 PRR12Q9ULL5 1215 aa16.68■□□□□ 0.26
TIMP3-201ENST00000266085 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
TIMP3-201ENST00000266085 A6NJR5 290 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 CLDN3O15551 220 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 CRCPO75575 148 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 SAMD7Q7Z3H4 446 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
TIMP3-201ENST00000266085 TCP11Q8WWU5 503 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 RUNDC3BQ96NL0 473 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 ELP3Q9H9T3 547 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 DAAM1Q9Y4D1 1078 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms