RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 KIF19Q2TAC6 998 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 ZC3H18Q86VM9 953 aaKnown RBP19.36■□□□□ 0.69
COL5A3-201ENST00000264828 HMGB1P1B2RPK0 211 aaPredicted RBP19.35■□□□□ 0.69
COL5A3-201ENST00000264828 KITP10721 976 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 CCHCR1Q8TD31 782 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 DYNLL2Q96FJ2 89 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 NDST4Q9H3R1 872 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 SUCLA2Q9P2R7 463 aaPredicted RBP19.35■□□□□ 0.69
COL5A3-201ENST00000264828 C6orf118Q5T5N4 469 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 ARHGEF25Q86VW2 580 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 NACC1Q96RE7 527 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 MAP3K4Q9Y6R4 1608 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 MMEP08473 750 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 OCRLQ01968 901 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 METTL23Q86XA0 190 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 TRIML2Q8N7C3 387 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 CCDC124Q96CT7 223 aaKnown RBP19.35■□□□□ 0.69
COL5A3-201ENST00000264828 DYDC2Q96IM9 177 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 SAYSD1Q9NPB0 183 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 RNF14Q9UBS8 474 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 IQANK1A0A1B0GTG1 560 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 CTTNQ14247 550 aaKnown RBP19.35■□□□□ 0.69
COL5A3-201ENST00000264828 GPR162Q16538 588 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 RCOR1Q9UKL0 485 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 SRPRBQ9Y5M8 271 aaKnown RBP19.35■□□□□ 0.69
COL5A3-201ENST00000264828 ANKARQ7Z5J8 1434 aa19.35■□□□□ 0.69
COL5A3-201ENST00000264828 PALMO75781 387 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 ZNF18P17022 549 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 GPATCH4Q5T3I0 446 aaKnown RBP19.34■□□□□ 0.69
COL5A3-201ENST00000264828 SERPINI1Q99574 410 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 SMYD3Q9H7B4 428 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 TYW5A2RUC4 315 aaKnown RBP19.34■□□□□ 0.69
COL5A3-201ENST00000264828 SFI1A8K8P3 1242 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 CCNE1P24864 410 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 ATICP31939 592 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 ADCY2Q08462 1091 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 CENPUQ71F23 418 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 CENPKQ9BS16 269 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 SEC31BQ9NQW1 1179 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 CAPN11Q9UMQ6 739 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 KPNA2P52292 529 aaKnown RBP19.34■□□□□ 0.69
COL5A3-201ENST00000264828 LRRC23Q53EV4 343 aaPredicted RBP19.34■□□□□ 0.69
COL5A3-201ENST00000264828 ANGPTL8Q6UXH0 198 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 ST13P4Q8IZP2 240 aaPredicted RBP19.34■□□□□ 0.69
COL5A3-201ENST00000264828 CEP70Q8NHQ1 597 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 FAF2Q96CS3 445 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 PI4K2BG5E9Z4 385 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 MXI1P50539 228 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 KCNV2Q8TDN2 545 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 DCPSQ96C86 337 aaKnown RBP19.34■□□□□ 0.69
COL5A3-201ENST00000264828 COPRSQ9NQ92 184 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 CPSF3Q9UKF6 684 aaKnown RBP19.34■□□□□ 0.69
COL5A3-201ENST00000264828 SCINQ9Y6U3 715 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 ABCC3O15438 1527 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 ARAP3Q8WWN8 1544 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 MFAP3LO75121 409 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 HSPA4LO95757 839 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 ZBED1O96006 694 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 CCND2P30279 289 aa19.34■□□□□ 0.69
COL5A3-201ENST00000264828 EIF4E1BA6NMX2 242 aaKnown RBP19.33■□□□□ 0.69
COL5A3-201ENST00000264828 XPOTO43592 962 aaKnown RBP19.33■□□□□ 0.69
COL5A3-201ENST00000264828 PITPNM3Q9BZ71 974 aa19.33■□□□□ 0.69
COL5A3-201ENST00000264828 SYT2Q8N9I0 419 aaPredicted RBP19.33■□□□□ 0.69
COL5A3-201ENST00000264828 PARVGQ9HBI0 331 aa19.33■□□□□ 0.69
COL5A3-201ENST00000264828 SPATA31E1Q6ZUB1 1445 aa19.33■□□□□ 0.69
COL5A3-201ENST00000264828 CCDC195A0A1B0GUA6 201 aa19.33■□□□□ 0.69
COL5A3-201ENST00000264828 SPAG7O75391 227 aa19.33■□□□□ 0.69
COL5A3-201ENST00000264828 EEPD1Q7L9B9 569 aa19.33■□□□□ 0.69
COL5A3-201ENST00000264828 SPATA17Q96L03 361 aa19.33■□□□□ 0.69
COL5A3-201ENST00000264828 ZBTB1Q9Y2K1 713 aa19.33■□□□□ 0.69
COL5A3-201ENST00000264828 USP17L8P0C7I0 530 aa19.33■□□□□ 0.68
COL5A3-201ENST00000264828 EIF3BP55884 814 aaKnown RBP19.33■□□□□ 0.68
COL5A3-201ENST00000264828 FAM47EQ6ZV65 393 aa19.33■□□□□ 0.68
COL5A3-201ENST00000264828 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.68
COL5A3-201ENST00000264828 WDR17Q8IZU2 1322 aa19.33■□□□□ 0.68
COL5A3-201ENST00000264828 GOLGA8MH3BSY2 632 aa19.33■□□□□ 0.68
COL5A3-201ENST00000264828 HSPA6P17066 643 aa19.33■□□□□ 0.68
COL5A3-201ENST00000264828 BEND6Q5SZJ8 279 aaPredicted RBP19.33■□□□□ 0.68
COL5A3-201ENST00000264828 CNKSR1Q969H4 720 aa19.33■□□□□ 0.68
COL5A3-201ENST00000264828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.33■□□□□ 0.68
COL5A3-201ENST00000264828 ADAMTS1Q9UHI8 967 aa19.33■□□□□ 0.68
COL5A3-201ENST00000264828 CUL1Q13616 776 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 DPP9Q86TI2 863 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 LRRC4Q9HBW1 653 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 PPARGC1AQ9UBK2 798 aaKnown RBP19.32■□□□□ 0.68
COL5A3-201ENST00000264828 HOXA13P31271 388 aaPredicted RBP19.32■□□□□ 0.68
COL5A3-201ENST00000264828 IL6STP40189 918 aaPredicted RBP19.32■□□□□ 0.68
COL5A3-201ENST00000264828 KCTD2Q14681 263 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 FAM182BQ5T319 152 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 CRLF3Q8IUI8 442 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 ABI1Q8IZP0 508 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 SNX24Q9Y343 169 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 H3BRJ5 948 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 TRIM59Q8IWR1 403 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 SIX6OS1Q8N1H7 587 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 OSBP2Q969R2 916 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 WDR11Q9BZH6 1224 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 MLXIPLQ9NP71 852 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 ZSWIM5Q9P217 1185 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 USP17L3A6NCW0 530 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms