RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 FGD4Q96M96 766 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 NAP1L3Q99457 506 aaPredicted RBP17.63■□□□□ 0.41
GPC1-201ENST00000264039 HAO1Q9UJM8 370 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 MTUS1Q9ULD2 1270 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 FRMPD1Q5SYB0 1578 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 TMEM120BA0PK00 339 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 CYP27B1O15528 508 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 SPAG7O75391 227 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 ZCCHC18P0CG32 403 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 RFC5P40937 340 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 SERPINB4P48594 390 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 RASSF2P50749 326 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 RBM5P52756 815 aaKnown RBP eCLIP17.63■□□□□ 0.41
GPC1-201ENST00000264039 CEP128Q6ZU80 1094 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 PHLDB2Q86SQ0 1253 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 CCDC65Q8IXS2 484 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 B4GALNT2Q8NHY0 566 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 F8VZ95 297 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 CCDC188H7C350 402 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 UBTFL6P0CB48 400 aaPredicted RBP17.62■□□□□ 0.41
GPC1-201ENST00000264039 XRCC5P13010 732 aaKnown RBP17.62■□□□□ 0.41
GPC1-201ENST00000264039 TMED2Q15363 201 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 AGBL2Q5U5Z8 902 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 GLIS3Q8NEA6 775 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 CUEDC2Q9H467 287 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 PPFIA2O75334 1257 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 ADCY2Q08462 1091 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 HHATQ5VTY9 493 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 LRRC8CQ8TDW0 803 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 TFCP2L1Q9NZI6 479 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 SLC9A1P19634 815 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 ATP4AP20648 1035 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 GNA11P29992 359 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 USP4Q13107 963 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 CEP72Q9P209 647 aa17.62■□□□□ 0.41
GPC1-201ENST00000264039 USP17L3A6NCW0 530 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 USP17L4A6NCW7 530 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 TRAF1Q13077 416 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 USP17L1Q7RTZ2 530 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 NEK8Q86SG6 692 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 GLYCTKQ8IVS8 523 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 ZBTB38Q8NAP3 1195 aaPredicted RBP17.61■□□□□ 0.41
GPC1-201ENST00000264039 ZCRB1Q8TBF4 217 aaKnown RBP17.61■□□□□ 0.41
GPC1-201ENST00000264039 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.61■□□□□ 0.41
GPC1-201ENST00000264039 DNAJC8O75937 253 aaPredicted RBP17.61■□□□□ 0.41
GPC1-201ENST00000264039 TMC3Q7Z5M5 1100 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 GPBP1Q86WP2 473 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 CCDC24Q8N4L8 307 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 IQCDQ96DY2 449 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 DYNLL2Q96FJ2 89 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 AGAP1Q9UPQ3 857 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 FAM205AQ6ZU69 1335 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 KLRF2D3W0D1 207 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 MGRN1O60291 552 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 PLCB3Q01970 1234 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 KCNH2Q12809 1159 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 SYCP3Q8IZU3 236 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 RPS6KC1Q96S38 1066 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 GPCPD1Q9NPB8 672 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 C2CD2Q9Y426 696 aa17.61■□□□□ 0.41
GPC1-201ENST00000264039 TOM1O60784 492 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 CUL3Q13618 768 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 SEPT2Q15019 361 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 LRRC36Q1X8D7 754 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 REXO1Q8N1G1 1221 aaKnown RBP17.6■□□□□ 0.41
GPC1-201ENST00000264039 CFAP61Q8NHU2 1237 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 RUBCNQ92622 972 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 LRRC37BQ96QE4 947 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 RHBDL2Q9NX52 303 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 TMEM2Q9UHN6 1383 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 DPPA5A6NC42 116 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 MYMKA6NI61 221 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 ADCY8P40145 1251 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 GJB7Q6PEY0 223 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 PDCD7Q8N8D1 485 aaKnown RBP17.6■□□□□ 0.41
GPC1-201ENST00000264039 GBP7Q8N8V2 638 aaPredicted RBP17.6■□□□□ 0.41
GPC1-201ENST00000264039 DNAJC9Q8WXX5 260 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 ARHGEF10LQ9HCE6 1279 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.6■□□□□ 0.41
GPC1-201ENST00000264039 KIAA1024Q9UPX6 916 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 KIDINS220Q9ULH0 1771 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 PECAM1P16284 738 aaPredicted RBP17.6■□□□□ 0.41
GPC1-201ENST00000264039 GNAQP50148 359 aa17.6■□□□□ 0.41
GPC1-201ENST00000264039 WDR17Q8IZU2 1322 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 ITIH3Q06033 890 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 KCNMA1Q12791 1236 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 MIIPQ5JXC2 388 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 MEI1Q5TIA1 1274 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 UBL4BQ8N7F7 174 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 ARL2BPQ9Y2Y0 163 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 ARAP3Q8WWN8 1544 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 TBCAO75347 108 aaKnown RBP17.59■□□□□ 0.41
GPC1-201ENST00000264039 SKIP12755 728 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 ZNF76P36508 570 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 C6orf89Q6UWU4 347 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 SUPT20HQ8NEM7 779 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 ZNF570Q96NI8 536 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 ALG13Q9NP73 1137 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms