RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 VSIG10LQ86VR7 867 aa9.1□□□□□ -0.95
GTF3C3-201ENST00000263956 SFR1Q86XK3 245 aa9.1□□□□□ -0.95
GTF3C3-201ENST00000263956 ABI1Q8IZP0 508 aa9.1□□□□□ -0.95
GTF3C3-201ENST00000263956 FAM193BQ96PV7 902 aaPredicted RBP9.1□□□□□ -0.95
GTF3C3-201ENST00000263956 TINF2Q9BSI4 451 aa9.1□□□□□ -0.95
GTF3C3-201ENST00000263956 AGO4Q9HCK5 861 aaKnown RBP9.1□□□□□ -0.95
GTF3C3-201ENST00000263956 RRN3P2A6NIE6 340 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 N4BP1O75113 896 aaKnown RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 TBC1D8O95759 1140 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 AKR1A1P14550 325 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 NR2F2P24468 414 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 CCNE1P24864 410 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 IQSEC1Q6DN90 963 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 RHPN2Q8IUC4 686 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 PCSK9Q8NBP7 692 aaKnown RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 NAP1L5Q96NT1 182 aaPredicted RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 GCOM2Q9BZD3 368 aaPredicted RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 POLR3FQ9H1D9 316 aaPredicted RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 UNC45AQ9H3U1 944 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 GOLPH3LQ9H4A5 285 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 LRFN2Q9ULH4 789 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 COL2A1P02458 1487 aaPredicted RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 TNRC6CQ9HCJ0 1690 aaKnown RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 BCORQ6W2J9 1755 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 BAZ2BQ9UIF8 2168 aaKnown RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 MEIS2O14770 477 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 KPNA6O60684 536 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 PRPF6O94906 941 aaKnown RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 TFRCP02786 760 aaKnown RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 RFC5P40937 340 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 SSR1P43307 286 aaKnown RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 TOB1P50616 345 aaPredicted RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 ACVR2BQ13705 512 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 RAPGEF1Q13905 1077 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 LDLRAD1Q5T700 205 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 CCDC155Q8N6L0 562 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 CCDC127Q96BQ5 260 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 APOL6Q9BWW8 343 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 SLC45A1Q9Y2W3 748 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 ADCY3O60266 1144 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 TMEM191BP0C7N4 346 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 SUPT20HL2P0C7V6 817 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 CYLC1P35663 651 aaPredicted RBP9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 JAG1P78504 1218 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 PPP2R3AQ06190 1150 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 IFNL1Q8IU54 200 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 APBA2Q99767 749 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 SYNCQ9H7C4 482 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 KCND2Q9NZV8 630 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 PARP2Q9UGN5 583 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 SNED1Q8TER0 1413 aa9.09□□□□□ -0.95
GTF3C3-201ENST00000263956 KCNJ18B7U540 433 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 P4HA1P13674 534 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 MUTP22033 750 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 KCNJ12Q14500 433 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 RBSNQ9H1K0 784 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 HMX1Q9NP08 348 aaPredicted RBP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 CEP83Q9Y592 693 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 OATP04181 439 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 PSMC2P35998 433 aaKnown RBP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 SLC26A2P50443 739 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 ARID5AQ03989 594 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 PTPAQ15257 358 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 SLC9C1Q4G0N8 1177 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 SMYD4Q8IYR2 804 aaPredicted RBP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 CAGE1Q8TC20 777 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 NUP58Q9BVL2 599 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 CCDC94Q9BW85 323 aaPredicted RBP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 BTBD7Q9P203 1132 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 ANKRD62A6NC57 917 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 SLC16A4O15374 487 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 HIP1RO75146 1068 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 DLATP10515 647 aaKnown RBP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 CYP2C19P33261 490 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 CETN2P41208 172 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 COASYQ13057 564 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 TRIM14Q14142 442 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 PPP4R3CPQ6ZMV5 832 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 DPH6Q7L8W6 267 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 FAM186BQ8IYM0 893 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 FAM43AQ8N2R8 423 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 AFG1LQ8WV93 481 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 SUCLA2Q9P2R7 463 aaPredicted RBP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 ODF2LQ9ULJ1 636 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 FAM86B1E9PN63 330 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 ASAP2O43150 1006 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 TLR2O60603 784 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 FAM86B2P0C5J1 330 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 XRCC6P12956 609 aaKnown RBP eCLIP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 ATF7P17544 494 aaPredicted RBP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 CIITAP33076 1130 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 EFNA5P52803 228 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 MXD4Q14582 209 aaPredicted RBP9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 VWA3BQ502W6 1294 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 RASAL3Q86YV0 1011 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 MSANTD4Q8NCY6 345 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 CCDC112Q8NEF3 446 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 CYP2W1Q8TAV3 490 aa9.08□□□□□ -0.96
GTF3C3-201ENST00000263956 POLD4Q9HCU8 107 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms