RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 COBLO75128 1261 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 IFNAR1P17181 557 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 ARHGDIAP52565 204 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 TRIM60Q495X7 471 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 RESP18Q5W5W9 173 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 OLA1Q9NTK5 396 aaKnown RBP18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 SLC13A4Q9UKG4 626 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 MYH3P11055 1940 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 PRPF3O43395 683 aaKnown RBP18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 ZBED1O96006 694 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 ARMCX2Q7L311 632 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 GIPC2Q8TF65 315 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 MCF2P10911 925 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 SLCO1A2P46721 670 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 TAF1BQ53T94 588 aaPredicted RBP18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 SLFN12LQ6IEE8 588 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 ZNF589Q86UQ0 364 aaPredicted RBP18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 KIF23Q02241 960 aaPredicted RBP18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 EMILIN3Q9NT22 766 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 SAMD9LQ8IVG5 1584 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 DPP9Q86TI2 863 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 KIF9Q9HAQ2 790 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 MYH11P35749 1972 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 CLIC2O15247 247 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 TAC1P20366 129 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 KRT82Q9NSB4 513 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 GOLGA8SH3BPF8 625 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 KRT37O76014 449 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 FSCBQ5H9T9 825 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 SPICE1Q8N0Z3 855 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 RYBPQ8N488 228 aaPredicted RBP18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 BPIFA3Q9BQP9 254 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 USP21Q9UK80 565 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 CA4P22748 312 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 LIFRP42702 1097 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 KCTD2Q14681 263 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 ARHGEF25Q86VW2 580 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 DHX36Q9H2U1 1008 aaKnown RBP18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 PNMA6AP0CW24 399 aaPredicted RBP18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 SPTLC3Q9NUV7 552 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 INTUQ9ULD6 942 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 GAS2L3Q86XJ1 694 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 NUDCD3Q8IVD9 361 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 SPAG7O75391 227 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 PITPNM3Q9BZ71 974 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 FAM96AQ9H5X1 160 aa18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 SUCLA2Q9P2R7 463 aaPredicted RBP18.74■□□□□ 0.59
NOTCH3-201ENST00000263388 PPEF1O14829 653 aaPredicted RBP18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 GYG2O15488 501 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 RWDD2BP57060 319 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 SIX6OS1Q8N1H7 587 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 SAMSN1Q9NSI8 373 aaKnown RBP18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 NOP53Q9NZM5 478 aaKnown RBP18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 ANLNQ9NQW6 1124 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 MMEP08473 750 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 SMARCA1P28370 1054 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 EPM2AIP1Q7L775 607 aaPredicted RBP18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 TMCO5AQ8N6Q1 288 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 TMEM60Q9H2L4 133 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 RPF1Q9H9Y2 349 aaKnown RBP18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 PNMA6FA0A0J9YX94 578 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 TMEM247A6NEH6 219 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 RNF139Q8WU17 664 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 APOL6Q9BWW8 343 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 CCNE1P24864 410 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 MAGEA9P43362 315 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 PAGE5Q96GU1 130 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 PLEKHF1Q96S99 279 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 NFU1Q9UMS0 254 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 BMP3P12645 472 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 ZC3H18Q86VM9 953 aaKnown RBP18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 WDR64B1ANS9 1081 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 PSAPP07602 524 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 NR5A1Q13285 461 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 PALMDQ9NP74 551 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 SLC8A2Q9UPR5 921 aa18.73■□□□□ 0.59
NOTCH3-201ENST00000263388 NPR1P16066 1061 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 KIF19Q2TAC6 998 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 TSC22D3Q99576 134 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 NEO1Q92859 1461 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 H3BRJ5 948 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 PSMA2P25787 234 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 RNF207Q6ZRF8 634 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 TRIM67Q6ZTA4 783 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 TRIM59Q8IWR1 403 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 MXD3Q9BW11 206 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 TADA3O75528 432 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 KRT31Q15323 416 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 WDR75Q8IWA0 830 aaKnown RBP18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 SPDYE1Q8NFV5 336 aaPredicted RBP18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 VPS39Q96JC1 886 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 NOVA2Q9UNW9 492 aaKnown RBP18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 ZFXP17010 805 aaPredicted RBP18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 GRAMD1BQ3KR37 738 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 LRRC37BQ96QE4 947 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 DISP1Q96F81 1524 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 SYDE2Q5VT97 1194 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 NBPF10Q6P3W6 841 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms