RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 CCDC65Q8IXS2 484 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 PROM2Q8N271 834 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 LRRC57Q8N9N7 239 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 PIGOQ8TEQ8 1089 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 IPO4Q8TEX9 1081 aaKnown RBP18.09■□□□□ 0.49
ZNF541-201ENST00000263351 UBLCP1Q8WVY7 318 aaPredicted RBP18.09■□□□□ 0.49
ZNF541-201ENST00000263351 CCT8L2Q96SF2 557 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 RUSC1Q9BVN2 902 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 DHX36Q9H2U1 1008 aaKnown RBP18.09■□□□□ 0.49
ZNF541-201ENST00000263351 PCNTO95613 3336 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 ABCB11O95342 1321 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
ZNF541-201ENST00000263351 PSMD2Q13200 908 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 GIT2Q14161 759 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 ASPRV1Q53RT3 343 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 KDM7AQ6ZMT4 941 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 TBC1D16Q8TBP0 767 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 MYCBPAPQ8TBZ2 947 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 MDM1Q8TC05 714 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 U2AF1L4Q8WU68 220 aaKnown RBP18.09■□□□□ 0.49
ZNF541-201ENST00000263351 AIPL1Q9NZN9 384 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 PCDHA1Q9Y5I3 950 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 PPP1R37O75864 691 aa18.08■□□□□ 0.49
ZNF541-201ENST00000263351 TTLL1O95922 423 aa18.08■□□□□ 0.49
ZNF541-201ENST00000263351 NOVP48745 357 aa18.08■□□□□ 0.49
ZNF541-201ENST00000263351 ZNF844Q08AG5 666 aa18.08■□□□□ 0.49
ZNF541-201ENST00000263351 GBP6Q6ZN66 633 aa18.08■□□□□ 0.49
ZNF541-201ENST00000263351 TAF4BQ92750 862 aa18.08■□□□□ 0.49
ZNF541-201ENST00000263351 DNAJC18Q9H819 358 aa18.08■□□□□ 0.49
ZNF541-201ENST00000263351 BMP2KQ9NSY1 1161 aaPredicted RBP18.08■□□□□ 0.49
ZNF541-201ENST00000263351 TMEM59LQ9UK28 342 aa18.08■□□□□ 0.49
ZNF541-201ENST00000263351 NRAPQ86VF7 1730 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 IGKV6D-41A0A0C4DH26 115 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 FAM86B1E9PN63 330 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 H0YGN5 161 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 DDX3XO00571 662 aaKnown RBP eCLIP18.08■□□□□ 0.48
ZNF541-201ENST00000263351 ZBTB5O15062 677 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 CPP00450 1065 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 FAM86B2P0C5J1 330 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 SPATA31C1P0DKV0 1188 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 NLRP14Q86W24 1093 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 UHMK1Q8TAS1 419 aaKnown RBP18.08■□□□□ 0.48
ZNF541-201ENST00000263351 ANO3Q9BYT9 981 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 TAF1DQ9H5J8 278 aaPredicted RBP18.08■□□□□ 0.48
ZNF541-201ENST00000263351 SIX2Q9NPC8 291 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 TAS2R14Q9NYV8 317 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 NFS1Q9Y697 457 aa18.08■□□□□ 0.48
ZNF541-201ENST00000263351 CETN3O15182 167 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 CTNNA1P35221 906 aaKnown RBP18.07■□□□□ 0.48
ZNF541-201ENST00000263351 MDH1P40925 334 aaKnown RBP18.07■□□□□ 0.48
ZNF541-201ENST00000263351 UBXN2AP68543 259 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 PRPF4BQ13523 1007 aaKnown RBP18.07■□□□□ 0.48
ZNF541-201ENST00000263351 EXOC3L4Q17RC7 722 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 TPCN2Q8NHX9 752 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 EPN3Q9H201 632 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 BHMT2Q9H2M3 363 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 USP40Q9NVE5 1235 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 ARMCX3Q9UH62 379 aaPredicted RBP18.07■□□□□ 0.48
ZNF541-201ENST00000263351 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
ZNF541-201ENST00000263351 KRIT1O00522 736 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 IL1R1P14778 569 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 NMT1P30419 496 aaKnown RBP18.07■□□□□ 0.48
ZNF541-201ENST00000263351 SPIRE1Q08AE8 756 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 NBPF9Q3BBW0 867 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 GLE1Q53GS7 698 aaKnown RBP18.07■□□□□ 0.48
ZNF541-201ENST00000263351 DAAM2Q86T65 1068 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 GLYCTKQ8IVS8 523 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 LNX1Q8TBB1 728 aaPredicted RBP18.07■□□□□ 0.48
ZNF541-201ENST00000263351 ELMO3Q96BJ8 720 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 IQCDQ96DY2 449 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 ERVK-5Q9HDB9 667 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 GCNT4Q9P109 453 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 SERPINB13Q9UIV8 391 aa18.07■□□□□ 0.48
ZNF541-201ENST00000263351 SMIM23A6NLE4 172 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 EML1O00423 815 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 CHMP2AO43633 222 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 FNTAP49354 379 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 USP11P51784 963 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 CPNE8Q86YQ8 564 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 DHX37Q8IY37 1157 aaKnown RBP18.06■□□□□ 0.48
ZNF541-201ENST00000263351 OLIG1Q8TAK6 271 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 SCFD2Q8WU76 684 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 CEP63Q96MT8 703 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 TMBIM4Q9HC24 238 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 ASTN1O14525 1302 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 NHSQ6T4R5 1651 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 MEIS2O14770 477 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 HSPA9P38646 679 aaKnown RBP18.06■□□□□ 0.48
ZNF541-201ENST00000263351 TBC1D10BQ4KMP7 808 aaPredicted RBP18.06■□□□□ 0.48
ZNF541-201ENST00000263351 DCAF12L1Q5VU92 463 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
ZNF541-201ENST00000263351 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 OTUD6BQ8N6M0 293 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 RDH13Q8NBN7 331 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 GLG1Q92896 1179 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 CD248Q9HCU0 757 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 KCNMB3Q9NPA1 279 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 PPP1R9AQ9ULJ8 1098 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 NOVA2Q9UNW9 492 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms