RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 TRIM9Q9C026 710 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 ZWILCHQ9H900 591 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 IL17RBQ9NRM6 502 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 ZNF335Q9H4Z2 1342 aaPredicted RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 HEXIM1O94992 359 aaKnown RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 FAM153BP0C7A2 387 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 SNAP25P60880 206 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 NONOQ15233 471 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 FAM153CQ494X1 144 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 TTI2Q6NXR4 508 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 TMEM154Q6P9G4 183 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 LCA5Q86VQ0 697 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 FAM133AQ8N9E0 248 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 FAM163AQ96GL9 167 aaPredicted RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 FAM153AQ9UHL3 310 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 STK38LQ9Y2H1 464 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 MYO5AQ9Y4I1 1855 aaKnown RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 EEF1GP26641 437 aaKnown RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 NLRP3Q96P20 1036 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 NUDT12Q9BQG2 462 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 TMEM47Q9BQJ4 181 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 LSM14BQ9BX40 385 aaKnown RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 SALL4Q9UJQ4 1053 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 N4BP2Q86UW6 1770 aaPredicted RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 VIL1P09327 827 aaKnown RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 CCNE1P24864 410 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 VAV2P52735 878 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 RIPK1Q13546 671 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 FAM133BQ5BKY9 247 aaKnown RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 WDR66Q8TBY9 1149 aa15.39■□□□□ 0.05
SCARF1-201ENST00000263071 L3MBTL3Q96JM7 780 aaPredicted RBP15.39■□□□□ 0.05
SCARF1-201ENST00000263071 CAMTA1Q9Y6Y1 1673 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 BICDL2A1A5D9 508 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 PSMD14O00487 310 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 KCNK3O14649 394 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 FAM200BP0CF97 657 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 GNAQP50148 359 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 KIAA0753Q2KHM9 967 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 LACTB2Q53H82 288 aaPredicted RBP15.38■□□□□ 0.05
SCARF1-201ENST00000263071 LONP2Q86WA8 852 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 GBP7Q8N8V2 638 aaPredicted RBP15.38■□□□□ 0.05
SCARF1-201ENST00000263071 FAM81BQ96LP2 452 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 NDNQ99608 321 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 PACSIN1Q9BY11 444 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 CCDC113Q9H0I3 377 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 BZW2Q9Y6E2 419 aaKnown RBP15.38■□□□□ 0.05
SCARF1-201ENST00000263071 TLDC2A0PJX2 215 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 MEIS1O00470 390 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 SEMA3EO15041 775 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 PALMO75781 387 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 NPTXRO95502 500 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 LACTBP83111 547 aaPredicted RBP15.38■□□□□ 0.05
SCARF1-201ENST00000263071 ATP11AP98196 1134 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 CALCRLQ16602 461 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 EMBQ6PCB8 327 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 OLFML1Q6UWY5 402 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 APLFQ8IW19 511 aaPredicted RBP15.38■□□□□ 0.05
SCARF1-201ENST00000263071 TNFRSF25Q93038 417 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 SEMA6BQ9H3T3 888 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 DLGAP2Q9P1A6 1054 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 ATXN10Q9UBB4 475 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 SLIT3O75094 1523 aa15.38■□□□□ 0.05
SCARF1-201ENST00000263071 ITIH6Q6UXX5 1313 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 SRGNP10124 158 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 INTS5Q6P9B9 1019 aaKnown RBP15.37■□□□□ 0.05
SCARF1-201ENST00000263071 SLC30A10Q6XR72 485 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 ERICH1Q86X53 443 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 FLOT1O75955 427 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 TRIM37O94972 964 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 PLS1Q14651 629 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 QPCTQ16769 361 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 HERC4Q5GLZ8 1057 aaPredicted RBP15.37■□□□□ 0.05
SCARF1-201ENST00000263071 PPP4R3AQ6IN85 833 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 ZNF365Q70YC5 407 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 SPICE1Q8N0Z3 855 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 TAF4BQ92750 862 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 MTMR8Q96EF0 704 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 EYA3Q99504 573 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 VCX3BQ9H321 246 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 VCX3AQ9NNX9 186 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 SNX12Q9UMY4 172 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 CFAP73A6NFT4 308 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 MYMKA6NI61 221 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 USP17L5A8MUK1 530 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 HIP1RO75146 1068 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 CAMTA2O94983 1202 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 NTSR2O95665 410 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 AMPD3Q01432 767 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 PAK2Q13177 524 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 RNF220Q5VTB9 566 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 TBC1D9BQ66K14 1250 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 REXO1Q8N1G1 1221 aaKnown RBP15.37■□□□□ 0.05
SCARF1-201ENST00000263071 UBLCP1Q8WVY7 318 aaPredicted RBP15.37■□□□□ 0.05
SCARF1-201ENST00000263071 SETDB2Q96T68 719 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 DPH5Q9H2P9 285 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 C6orf50Q9HD87 102 aa15.37■□□□□ 0.05
SCARF1-201ENST00000263071 MST1RQ04912 1400 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms