RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 UIMC1Q96RL1 719 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 ZNF577Q9BSK1 485 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 HCN4Q9Y3Q4 1203 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 PCDHA2Q9Y5H9 948 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 CHD7Q9P2D1 2997 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 SPTBN5Q9NRC6 3674 aaKnown RBP13.91□□□□□ -0.18
TRAF4-202ENST00000262396 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 MBLAC1A4D2B0 266 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-202ENST00000262396 HBP1O60381 514 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 KLRC1P26715 233 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 ADD1P35611 737 aaKnown RBP13.91□□□□□ -0.18
TRAF4-202ENST00000262396 RCAN1P53805 252 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
TRAF4-202ENST00000262396 TMEM31Q5JXX7 168 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 SWSAP1Q6NVH7 229 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 NPAS4Q8IUM7 802 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 RASEFQ8IZ41 740 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 REXO1Q8N1G1 1221 aaKnown RBP13.91□□□□□ -0.18
TRAF4-202ENST00000262396 METTL13Q8N6R0 699 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 CCDC148Q8NFR7 591 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 CELF4Q9BZC1 486 aaKnown RBP13.91□□□□□ -0.18
TRAF4-202ENST00000262396 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 IGFLR1Q9H665 355 aa13.91□□□□□ -0.18
TRAF4-202ENST00000262396 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 SMIM35A0A1B0GVV1 85 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 IPO5O00410 1097 aaKnown RBP13.9□□□□□ -0.18
TRAF4-202ENST00000262396 MEIS1O00470 390 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 RPS6KA5O75582 802 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 REC8O95072 547 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 PSAPP07602 524 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 CDC27P30260 824 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 SETQ01105 290 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-202ENST00000262396 ITGB3BPQ13352 177 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-202ENST00000262396 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-202ENST00000262396 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-202ENST00000262396 CSPP1Q1MSJ5 1256 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 TSGA10IPQ3SY00 556 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 ZNF484Q5JVG2 852 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 MARCH8Q5T0T0 291 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 NIPA1Q7RTP0 329 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 GJD3Q8N144 294 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 SCLT1Q96NL6 688 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 PCYT2Q99447 389 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 TBC1D22BQ9NU19 505 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 PADI3Q9ULW8 664 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 PCDHB7Q9Y5E2 793 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 SQORQ9Y6N5 450 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 COL4A4P53420 1690 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-202ENST00000262396 DOCK5Q9H7D0 1870 aa13.9□□□□□ -0.18
TRAF4-202ENST00000262396 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-202ENST00000262396 CPA1P15085 419 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 TMEM266Q2M3C6 531 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 PRR16Q569H4 304 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 TRIM22Q8IYM9 498 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 MICAL1Q8TDZ2 1067 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 ATP8B4Q8TF62 1192 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
TRAF4-202ENST00000262396 FAM122AQ96E09 287 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 SLC26A6Q9BXS9 759 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 EPHX3Q9H6B9 360 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 AGO3Q9H9G7 860 aaKnown RBP13.89□□□□□ -0.19
TRAF4-202ENST00000262396 AAASQ9NRG9 546 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 CEP131Q9UPN4 1083 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 PTPRSQ13332 1948 aa13.89□□□□□ -0.19
TRAF4-202ENST00000262396 MICAL3Q7RTP6 2002 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 CPLX1O14810 134 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 GPR182O15218 404 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 DGKIO75912 1065 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 IL9P15248 144 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 TMOD1P28289 359 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 NLRP5P59047 1200 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 CLUL1Q15846 466 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 CPLX2Q6PUV4 134 aaKnown RBP13.88□□□□□ -0.19
TRAF4-202ENST00000262396 CMTR2Q8IYT2 770 aaKnown RBP13.88□□□□□ -0.19
TRAF4-202ENST00000262396 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-202ENST00000262396 PHKBQ93100 1093 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 MAP7D2Q96T17 732 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 PLVAPQ9BX97 442 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 ALG13Q9NP73 1137 aaKnown RBP13.88□□□□□ -0.19
TRAF4-202ENST00000262396 RAPGEFL1Q9UHV5 662 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 AKT3Q9Y243 479 aa13.88□□□□□ -0.19
TRAF4-202ENST00000262396 COL1A2P08123 1366 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 FAM86B1E9PN63 330 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 GRM6O15303 877 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 PRPF3O43395 683 aaKnown RBP13.87□□□□□ -0.19
TRAF4-202ENST00000262396 PPFIA3O75145 1194 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 FAM86B2P0C5J1 330 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 ALADP13716 330 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 CLK2P49760 499 aaKnown RBP13.87□□□□□ -0.19
TRAF4-202ENST00000262396 NDUFV1P49821 464 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
TRAF4-202ENST00000262396 FUT2Q10981 343 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 ZNF746Q6NUN9 644 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-202ENST00000262396 ABHD15Q6UXT9 468 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-202ENST00000262396 FAM178BQ8IXR5 827 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms