RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 ARMCX3Q9UH62 379 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 NR2E1Q9Y466 385 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 SPATA31D1Q6ZQQ2 1576 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 PPP2R5BQ15173 497 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 ALX1Q15699 326 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 TMC3Q7Z5M5 1100 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 ZNF483Q8TF39 744 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 NUDCD1Q96RS6 583 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 TTYH3Q9C0H2 523 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 FAM114A2Q9NRY5 505 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 MST1RQ04912 1400 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 E9PMD0 336 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 PRLRP16471 622 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 TARSP26639 723 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 CHRNDQ07001 517 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 MTM1Q13496 603 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 FAM118BQ9BPY3 351 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 FAM129AQ9BZQ8 928 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 C3P01024 1663 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 SPAG7O75391 227 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 TNFAIP3P21580 790 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 MRPL12P52815 198 aaKnown RBP17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 UBE2SQ16763 222 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 TSNAXIP1Q2TAA8 658 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 MEI1Q5TIA1 1274 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 TMEM154Q6P9G4 183 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 CEP72Q9P209 647 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 PCDHA6Q9UN73 950 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 PCDHA8Q9Y5H6 950 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 CNGA1P29973 690 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 WLSQ5T9L3 541 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 LRP10Q7Z4F1 713 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 INPP4AQ96PE3 977 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 KBTBD4Q9NVX7 518 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 SIK3Q9Y2K2 1263 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 SLC12A6Q9UHW9 1150 aa17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 CHD2O14647 1828 aaKnown RBP17.25■□□□□ 0.35
PRPF40B-201ENST00000261897 POC1B-GALNT4F8VUJ3 575 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 XRCC5P13010 732 aaKnown RBP17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 PBKQ96KB5 322 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 PIGSQ96S52 555 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 TMEM120BA0PK00 339 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 DDAH1O94760 285 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 PABPC4Q13310 644 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 TEKT4Q8WW24 435 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 C18orf8Q96DM3 657 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 PURBQ96QR8 312 aaKnown RBP17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 TGS1Q96RS0 853 aaKnown RBP17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 HDAC9Q9UKV0 1011 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 RTCBQ9Y3I0 505 aaKnown RBP17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 MYH6P13533 1939 aa17.24■□□□□ 0.35
PRPF40B-201ENST00000261897 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 TLR2O60603 784 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 KRT15P19012 456 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 GNA11P29992 359 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 PRDX5P30044 214 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 XRCC4Q13426 336 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 TMED8Q6PL24 325 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 C6orf89Q6UWU4 347 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 CCDC65Q8IXS2 484 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 TGFBRAP1Q8WUH2 860 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 ERP27Q96DN0 273 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 ISCA1Q9BUE6 129 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 PAPOLBQ9NRJ5 636 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 CTNNAL1Q9UBT7 734 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 DCTN4Q9UJW0 460 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 BRAFP15056 766 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 CREB1P16220 341 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 LRIG3Q6UXM1 1119 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 NSMFQ6X4W1 530 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 TBC1D22AQ8WUA7 517 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 NUDT12Q9BQG2 462 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 KDM4CQ9H3R0 1056 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 HAO1Q9UJM8 370 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 SNUPNO95149 360 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 STAT1P42224 750 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 CYP2J2P51589 502 aa17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 STMN4Q9H169 189 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-201ENST00000261897 THAP12O43422 761 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 TOM1O60784 492 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 GCNT3O95395 438 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 BAG2O95816 211 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 BYSLQ13895 437 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 TMED2Q15363 201 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 BARGINQ6ZT62 677 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 ZNF571Q7Z3V5 609 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 APBB1IPQ7Z5R6 666 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 BAP1Q92560 729 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 NAF1Q96HR8 494 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 ZNF570Q96NI8 536 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 CYTH2Q99418 400 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 PITPNM3Q9BZ71 974 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms