RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CYP27A1Q02318 531 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 HS1BP3Q53T59 392 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 CREB3O43889 395 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 MOCS2O96007 188 aaPredicted RBP13.13□□□□□ -0.31
SPG11-201ENST00000261866 INPP5BP32019 993 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
SPG11-201ENST00000261866 EIF4A3P38919 411 aaKnown RBP13.13□□□□□ -0.31
SPG11-201ENST00000261866 GCLMP48507 274 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
SPG11-201ENST00000261866 SFR1Q86XK3 245 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 PASKQ96RG2 1323 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 COPB2P35606 906 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 BPIFB4P59827 614 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 TUBB2AQ13885 445 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 ACCSLQ4AC99 568 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 TRIML1Q8N9V2 468 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 RSRC1Q96IZ7 334 aaKnown RBP13.12□□□□□ -0.31
SPG11-201ENST00000261866 AK8Q96MA6 479 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 TUBB2BQ9BVA1 445 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 CLDN3O15551 220 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
SPG11-201ENST00000261866 FBXW4P57775 412 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 NME3Q13232 169 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 PPP1R13BQ96KQ4 1090 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 SRGAP2BP0DMP2 458 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 FCER1AP12319 257 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 ZKSCAN8Q15776 578 aaPredicted RBP13.12□□□□□ -0.31
SPG11-201ENST00000261866 ZBTB41Q5SVQ8 909 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 CLEC4GQ6UXB4 293 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 B4GALNT4Q76KP1 1039 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 NHEJ1Q9H9Q4 299 aaPredicted RBP13.12□□□□□ -0.31
SPG11-201ENST00000261866 PSMA2P25787 234 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 SZRD1Q7Z422 152 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 CACNA2D3Q8IZS8 1091 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 ATP8A1Q9Y2Q0 1164 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 CDKL2Q92772 493 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 HEMGNQ9BXL5 484 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 CNOT7Q9UIV1 285 aaKnown RBP13.12□□□□□ -0.31
SPG11-201ENST00000261866 EFCAB8A8MWE9 144 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 GOLGA8MH3BSY2 632 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 DPYSL4O14531 572 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 PRELPP51888 382 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 MAN2A1Q16706 1144 aa13.12□□□□□ -0.31
SPG11-201ENST00000261866 PRDM15P57071 1507 aaPredicted RBP13.12□□□□□ -0.31
SPG11-201ENST00000261866 DCAF4L1Q3SXM0 396 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 DCP1AQ9NPI6 582 aaPredicted RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 NVLO15381 856 aaKnown RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 INPP1P49441 399 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 CDR2Q01850 454 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 PADI6Q6TGC4 694 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 ZNF513Q8N8E2 541 aaPredicted RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 AKR1B1P15121 316 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 WHAMMP3Q1A5X7 153 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 ELMOD1Q8N336 334 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 GSDMAQ96QA5 445 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 TUBBP07437 444 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 TRAPPC10P48553 1259 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 KDELC2Q7Z4H8 507 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 ERICH1Q86X53 443 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 APOBEC3FQ8IUX4 373 aaKnown RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 BAIAP2L1Q9UHR4 511 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 USH1CQ9Y6N9 552 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 ENAHQ8N8S7 591 aaPredicted RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 DEPDC1BQ8WUY9 529 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 UTYO14607 1347 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 RNF40O75150 1001 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 RNF219Q5W0B1 726 aaPredicted RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 XAB2Q9HCS7 855 aaKnown RBP13.11□□□□□ -0.31
SPG11-201ENST00000261866 ANLNQ9NQW6 1124 aa13.11□□□□□ -0.31
SPG11-201ENST00000261866 WDR64B1ANS9 1081 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 F5H6K3 240 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 KLRC3Q07444 240 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 SCARF1Q14162 830 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 MFSD14CQ5VZR4 134 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 ARHGEF5Q12774 1597 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 OPHN1O60890 802 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 TOM1L1O75674 476 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 CHGBP05060 677 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms