RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 B3GNT9Q6UX72 402 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 TRIM50Q86XT4 487 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 PPP1R13LQ8WUF5 828 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
PFDN1-201ENST00000261813 TMEM60Q9H2L4 133 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 UNC45AQ9H3U1 944 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 PCDHB6Q9Y5E3 794 aa13.05□□□□□ -0.32
PFDN1-201ENST00000261813 A0A0U1RQG5 324 aaPredicted RBP13.04□□□□□ -0.32
PFDN1-201ENST00000261813 HAS3O00219 553 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 TBX3O15119 743 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 GAS7O60861 476 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 ATG7O95352 703 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 KRT76Q01546 638 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 PTGDRQ13258 359 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 ITGA7Q13683 1181 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 UTP14CQ5TAP6 766 aaKnown RBP13.04□□□□□ -0.32
PFDN1-201ENST00000261813 C1orf53Q5VUE5 145 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 ZNF746Q6NUN9 644 aaPredicted RBP13.04□□□□□ -0.32
PFDN1-201ENST00000261813 ABHD15Q6UXT9 468 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 SLC43A3Q8NBI5 491 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 VTI1AQ96AJ9 217 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 FAM20AQ96MK3 541 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 MTMR9Q96QG7 549 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 PCYT2Q99447 389 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
PFDN1-201ENST00000261813 SCN10AQ9Y5Y9 1956 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 IGKV6D-21A0A0A0MT36 114 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 A0A1W2PPC1 479 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 ARVCFO00192 962 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 CHMP2AO43633 222 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 LGR5O75473 907 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 BMP15O95972 392 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 CDK7P50613 346 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 RTP1P59025 263 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
PFDN1-201ENST00000261813 CALCRLQ16602 461 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 NBPF20Q3BBV1 942 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 TRIM60Q495X7 471 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 SLC17A8Q8NDX2 589 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.03□□□□□ -0.32
PFDN1-201ENST00000261813 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 EMSYQ7Z589 1322 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
PFDN1-201ENST00000261813 WDR64B1ANS9 1081 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 H3BRB1 525 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 MARCH6O60337 910 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 SUPT20HL2P0C7V6 817 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.33
PFDN1-201ENST00000261813 CHMP4BP1P59074 171 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 FAM173BQ6P4H8 233 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 PACS2Q86VP3 889 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 CCDC60Q8IWA6 550 aaPredicted RBP13.02□□□□□ -0.33
PFDN1-201ENST00000261813 SMAP1Q8IYB5 467 aaPredicted RBP13.02□□□□□ -0.33
PFDN1-201ENST00000261813 SLFN12Q8IYM2 578 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 C4orf32Q8N8J7 132 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 KATNAL1Q9BW62 490 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.33
PFDN1-201ENST00000261813 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 TCEAL9Q9UHQ7 104 aa13.02□□□□□ -0.33
PFDN1-201ENST00000261813 EML1O00423 815 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 OR52Z1P0C646 297 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 MCM4P33991 863 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 TXKP42681 527 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
PFDN1-201ENST00000261813 SPIRE1Q08AE8 756 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 KIAA0753Q2KHM9 967 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 MIS18BP1Q6P0N0 1132 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 AFAP1L1Q8TED9 768 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 PRO3102Q9H379 93 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 RNPEPQ9H4A4 650 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 SMARCAD1Q9H4L7 1026 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 ATP11BQ9Y2G3 1177 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 PCDHA10Q9Y5I2 948 aa13.01□□□□□ -0.33
PFDN1-201ENST00000261813 DLL1O00548 723 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 PQBP1O60828 265 aaKnown RBP13□□□□□ -0.33
PFDN1-201ENST00000261813 YEATS4O95619 227 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 ATP4AP20648 1035 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 MARK3P27448 753 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 SFNP31947 248 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 STAT5BP51692 787 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 JAK3P52333 1124 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 TLE2Q04725 743 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 HIC1Q14526 733 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 FAM47CQ5HY64 1035 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 SWSAP1Q6NVH7 229 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 PLPPR4Q7Z2D5 763 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 ANKRD33Q7Z3H0 272 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 SESTD1Q86VW0 696 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 FAM126BQ8IXS8 530 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 TMEM87AQ8NBN3 555 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 RDM1Q8NG50 284 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 GLG1Q92896 1179 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 SPATA32Q96LK8 384 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 TOX2Q96NM4 488 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 AZI2Q9H6S1 392 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 TTC12Q9H892 705 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms