RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PSMD1Q99460 953 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.35■□□□□ 0.377e-7■■□□□ 14.3
LMNB1-201ENST00000261366 ACTR5Q9H9F9 607 aaPredicted RBP17.35■□□□□ 0.37
LMNB1-201ENST00000261366 SLC24A3Q9HC58 644 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 OSGEPQ9NPF4 335 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 UBAP1LF5GYI3 381 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 EZRP15311 586 aaKnown RBP17.35■□□□□ 0.37
LMNB1-201ENST00000261366 CDC25CP30307 473 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 CASP5P51878 434 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 SEMA3FQ13275 785 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 ZCWPW2Q504Y3 356 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 TBC1D9BQ66K14 1250 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 LRIG3Q6UXM1 1119 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 TBC1D1Q86TI0 1168 aaPredicted RBP17.35■□□□□ 0.37
LMNB1-201ENST00000261366 GPBP1Q86WP2 473 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 TRIM59Q8IWR1 403 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 RAB34Q9BZG1 259 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 MTFR1LQ9H019 292 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 SEPT11Q9NVA2 429 aaKnown RBP17.35■□□□□ 0.37
LMNB1-201ENST00000261366 SRP68Q9UHB9 627 aaKnown RBP17.35■□□□□ 0.37
LMNB1-201ENST00000261366 NAGPAQ9UK23 515 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 AJAP1Q9UKB5 411 aaPredicted RBP17.35■□□□□ 0.37
LMNB1-201ENST00000261366 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 MYH1P12882 1939 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 LDHBP07195 334 aaKnown RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 PAX7P23759 505 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 GBP2P32456 591 aaPredicted RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 STAT3P40763 770 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 LLGL1Q15334 1064 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 EMC10Q5UCC4 262 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 TATDN2Q93075 761 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 NUCKS1Q9H1E3 243 aaKnown RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 BCAS3Q9H6U6 928 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 BMP2KQ9NSY1 1161 aaPredicted RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 HDAC9Q9UKV0 1011 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 CD2APQ9Y5K6 639 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 SPDYE3A6NKU9 549 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 F8W031 263 aaPredicted RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 MEIS1O00470 390 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 EDIL3O43854 480 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 PLTPP55058 493 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 BIRC3Q13489 604 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 CCDC38Q502W7 563 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 TPCN2Q8NHX9 752 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 RBM46Q8TBY0 533 aaKnown RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 SCFD1Q8WVM8 642 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 GANQ9H2C0 597 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 EMILIN3Q9NT22 766 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 UTP11Q9Y3A2 253 aaKnown RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 F8VZ95 297 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 UCHL3P15374 230 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 CHN1P15882 459 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 COBLL1Q53SF7 1204 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 IRF2BP2Q7Z5L9 587 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 EDEM3Q9BZQ6 932 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 IKZF4Q9H2S9 585 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 A1CFQ9NQ94 594 aaKnown RBP17.34■□□□□ 0.37
LMNB1-201ENST00000261366 L3MBTL1Q9Y468 752 aa17.34■□□□□ 0.37
LMNB1-201ENST00000261366 GFPT2O94808 682 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 MMEP08473 750 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 VIMP08670 466 aaKnown RBP17.33■□□□□ 0.36
LMNB1-201ENST00000261366 DRD4P21917 467 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 ADCY7P51828 1080 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 PLCB4Q15147 1175 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 AADACL2Q6P093 401 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 THOC1Q96FV9 657 aaKnown RBP17.33■□□□□ 0.36
LMNB1-201ENST00000261366 ELAC2Q9BQ52 826 aaKnown RBP17.33■□□□□ 0.36
LMNB1-201ENST00000261366 DDX25Q9UHL0 483 aaKnown RBP17.33■□□□□ 0.36
LMNB1-201ENST00000261366 MYH4Q9Y623 1939 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 SLC16A2P36021 539 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 CDK8P49336 464 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 TAX1BP1Q86VP1 789 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 PROM2Q8N271 834 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 LRRC57Q8N9N7 239 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 MGARPQ8TDB4 240 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 CHMP6Q96FZ7 201 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 PBKQ96KB5 322 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 FMO2Q99518 471 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 AIPL1Q9NZN9 384 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 BCS1LQ9Y276 419 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 SNX24Q9Y343 169 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 ABCB11O95342 1321 aa17.33■□□□□ 0.36
LMNB1-201ENST00000261366 CLIC2O15247 247 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 BUB1BO60566 1050 aaPredicted RBP17.32■□□□□ 0.36
LMNB1-201ENST00000261366 NEBLO76041 1014 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 IFI35P80217 286 aaPredicted RBP17.32■□□□□ 0.36
LMNB1-201ENST00000261366 SYN2Q92777 582 aaPredicted RBP17.32■□□□□ 0.36
LMNB1-201ENST00000261366 XPO6Q96QU8 1125 aaKnown RBP17.32■□□□□ 0.36
LMNB1-201ENST00000261366 SPZ1Q9BXG8 430 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 ANKIB1Q9P2G1 1089 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 PCDHA12Q9UN75 941 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 EIF4E1BA6NMX2 242 aaKnown RBP17.32■□□□□ 0.36
LMNB1-201ENST00000261366 CETN3O15182 167 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 KRT13P13646 458 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.361e-6■■■■□ 19.3
LMNB1-201ENST00000261366 EXOC3L4Q17RC7 722 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 CCDC26Q8TAB7 109 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 ACTRT1Q8TDG2 376 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms