RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 IRX3P78415 501 aaPredicted RBP19.55■□□□□ 0.72
SSB-201ENST00000260956 ZBED6P86452 979 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 TBC1D8BQ0IIM8 1120 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 B3GNT9Q6UX72 402 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 ZNF662Q6ZS27 426 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 EPM2AIP1Q7L775 607 aaPredicted RBP19.55■□□□□ 0.72
SSB-201ENST00000260956 SMCR8Q8TEV9 937 aaPredicted RBP19.55■□□□□ 0.72
SSB-201ENST00000260956 CHURC1Q8WUH1 139 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 SCFD1Q8WVM8 642 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 SLC5A5Q92911 643 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 PRDM10Q9NQV6 1147 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 EPHB6O15197 1021 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 PSMD10O75832 226 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 NDUFA10O95299 355 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 H2AFXP16104 143 aaPredicted RBP19.54■□□□□ 0.72
SSB-201ENST00000260956 CASQ1P31415 396 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 SP3Q02447 781 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 CREBRFQ8IUR6 639 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 CCDC65Q8IXS2 484 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 KCTD17Q8N5Z5 321 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 IQCDQ96DY2 449 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 CCDC94Q9BW85 323 aaPredicted RBP19.54■□□□□ 0.72
SSB-201ENST00000260956 TANGO6Q9C0B7 1094 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 NDST4Q9H3R1 872 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 CGNQ9P2M7 1197 aaKnown RBP19.54■□□□□ 0.72
SSB-201ENST00000260956 FEM1BQ9UK73 627 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 STK24Q9Y6E0 443 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 EPN1Q9Y6I3 576 aaPredicted RBP19.54■□□□□ 0.72
SSB-201ENST00000260956 RLFQ13129 1914 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 RPTORQ8N122 1335 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 SPDYE16A6NNV3 312 aaPredicted RBP19.54■□□□□ 0.72
SSB-201ENST00000260956 URI1O94763 535 aaPredicted RBP19.54■□□□□ 0.72
SSB-201ENST00000260956 OSBPP22059 807 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 PABPC4Q13310 644 aaKnown RBP eCLIP19.54■□□□□ 0.721e-18■■■■□ 20.4
SSB-201ENST00000260956 GIT2Q14161 759 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 Q3C1V9 767 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 NCAPH2Q6IBW4 605 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 CD99L2Q8TCZ2 262 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 CEP63Q96MT8 703 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 LZTFL1Q9NQ48 299 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 PNMA3Q9UL41 463 aa19.54■□□□□ 0.72
SSB-201ENST00000260956 WDR46O15213 610 aaKnown RBP19.53■□□□□ 0.72
SSB-201ENST00000260956 FKTNO75072 461 aa19.53■□□□□ 0.72
SSB-201ENST00000260956 CNMDO75829 334 aa19.53■□□□□ 0.72
SSB-201ENST00000260956 FGFR1OPO95684 399 aaKnown RBP19.53■□□□□ 0.72
SSB-201ENST00000260956 HOXD13P35453 343 aa19.53■□□□□ 0.72
SSB-201ENST00000260956 HSD17B4P51659 736 aa19.53■□□□□ 0.72
SSB-201ENST00000260956 PPP2R5CQ13362 524 aa19.53■□□□□ 0.72
SSB-201ENST00000260956 ZNF397Q8NF99 534 aaPredicted RBP19.53■□□□□ 0.72
SSB-201ENST00000260956 ERMNQ8TAM6 284 aa19.53■□□□□ 0.72
SSB-201ENST00000260956 HSD17B14Q9BPX1 270 aa19.53■□□□□ 0.72
SSB-201ENST00000260956 SLF1Q9BQI6 1058 aa19.53■□□□□ 0.72
SSB-201ENST00000260956 GCOM1H8Y6P7 765 aaPredicted RBP19.52■□□□□ 0.72
SSB-201ENST00000260956 POLR2MP0CAP2 368 aa19.52■□□□□ 0.72
SSB-201ENST00000260956 LACTBP83111 547 aaPredicted RBP19.52■□□□□ 0.72
SSB-201ENST00000260956 BMT2Q1RMZ1 405 aa19.52■□□□□ 0.72
SSB-201ENST00000260956 ERCC6LQ2NKX8 1250 aa19.52■□□□□ 0.72
SSB-201ENST00000260956 FBXO38Q6PIJ6 1188 aa19.52■□□□□ 0.72
SSB-201ENST00000260956 BTBD7Q9P203 1132 aa19.52■□□□□ 0.72
SSB-201ENST00000260956 MRPL11Q9Y3B7 192 aaKnown RBP19.52■□□□□ 0.72
SSB-201ENST00000260956 ZSWIM8A7E2V4 1837 aa19.52■□□□□ 0.72
SSB-201ENST00000260956 LOXHD1Q8IVV2 1947 aa19.52■□□□□ 0.72
SSB-201ENST00000260956 FLOT1O75955 427 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 SSBP05455 408 aaKnown RBP eCLIP19.51■□□□□ 0.71
SSB-201ENST00000260956 CASP5P51878 434 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 FKBP3Q00688 224 aaKnown RBP19.51■□□□□ 0.71
SSB-201ENST00000260956 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
SSB-201ENST00000260956 COG2Q14746 738 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 CCDC174Q6PII3 467 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 SAMD1Q6SPF0 538 aaPredicted RBP19.51■□□□□ 0.71
SSB-201ENST00000260956 RSRC2Q7L4I2 434 aaKnown RBP19.51■□□□□ 0.71
SSB-201ENST00000260956 OTOP1Q7RTM1 612 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 TRIM59Q8IWR1 403 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 BAP1Q92560 729 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 ATG4CQ96DT6 458 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 TSG101Q99816 390 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 EIF2AK1Q9BQI3 630 aaKnown RBP19.51■□□□□ 0.71
SSB-201ENST00000260956 REEP2Q9BRK0 252 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 CARD6Q9BX69 1037 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 BMP2KQ9NSY1 1161 aaPredicted RBP19.51■□□□□ 0.71
SSB-201ENST00000260956 MYO1AQ9UBC5 1043 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 EYA4O95677 639 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 EDRF1Q3B7T1 1238 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 FKBP15Q5T1M5 1219 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 ADAMTS5Q9UNA0 930 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 COL4A3BPQ9Y5P4 624 aa19.51■□□□□ 0.71
SSB-201ENST00000260956 FRMPD4Q14CM0 1322 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 EFCAB8A8MWE9 144 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 MEIS1O00470 390 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 KIF5CO60282 957 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 CFBP00751 764 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 ICAM1P05362 532 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 TRIM21P19474 475 aaKnown RBP19.5■□□□□ 0.71
SSB-201ENST00000260956 DSG3P32926 999 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 KCNMA1Q12791 1236 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 LBX2Q6XYB7 198 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 CLEC4DQ8WXI8 215 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 PAGR1Q9BTK6 254 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 RUSC1Q9BVN2 902 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 MORF4L1Q9UBU8 362 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms