RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 FBXO11Q86XK2 927 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 GABPB2Q8TAK5 448 aaPredicted RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 EFHD1Q9BUP0 239 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 PREX2Q70Z35 1606 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 TESPA1A2RU30 521 aaPredicted RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 LRRC53A6NM62 1247 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 SEMA3EO15041 775 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 ATP5HO75947 161 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 LRRC36Q1X8D7 754 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 XKR9Q5GH70 373 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 MB21D2Q8IYB1 491 aaPredicted RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 CDKL2Q92772 493 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 SAYSD1Q9NPB0 183 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 ATG3Q9NT62 314 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 NDE1Q9NXR1 346 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 WARS2Q9UGM6 360 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 UBN2Q6ZU65 1347 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 CFAP69A5D8W1 941 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 LMNB2Q03252 620 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 ZNF211Q13398 564 aaPredicted RBP10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 ALKBH5Q6P6C2 394 aaKnown RBP10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 POMGNT1Q8WZA1 660 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 TAF6LQ9Y6J9 622 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 CCDC195A0A1B0GUA6 201 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 SKAP2O75563 359 aaPredicted RBP10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 CA8P35219 290 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 PSMC2P35998 433 aaKnown RBP10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 LRRC31Q6UY01 552 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 NLRP10Q86W26 655 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 LY9Q9HBG7 655 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 BAG5Q9UL15 447 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 CAPN11Q9UMQ6 739 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 ANO9A1A5B4 782 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 NOP56O00567 594 aaKnown RBP10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 PRPF6O94906 941 aaKnown RBP10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 IRAK1P51617 712 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 TMPRSS15P98073 1019 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 SYNE4Q8N205 404 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 OLFM3Q96PB7 478 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 KRT1P04264 644 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 MYL1P05976 194 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 BRAFP15056 766 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 OR2W6PQ8NHA6 318 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 HAUS8Q9BT25 410 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 TAF1DQ9H5J8 278 aaPredicted RBP10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 BATF3Q9NR55 127 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 FGFR1OP2Q9NVK5 253 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 CPP00450 1065 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 KCNA3P22001 575 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 AP2B1P63010 937 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 FMR1Q06787 632 aaKnown RBP eCLIP10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 SLC12A1Q13621 1099 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 ARHGAP18Q8N392 663 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 CPVLQ9H3G5 476 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 CYP4F11Q9HBI6 524 aa10.48□□□□□ -0.73
CTDSPL2-201ENST00000260327 ZNF804BA4D1E1 1349 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 TOM1O60784 492 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 JDP2Q8WYK2 163 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 MS4A14Q96JA4 679 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 CHP1Q99653 195 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 UBE2TQ9NPD8 197 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 TRIM10Q9UDY6 481 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 TRAF3IP3Q9Y228 551 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 PP2D1A8MPX8 630 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 TCP11X1B4DZS4 312 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 H7C1W4 665 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 NMT2O60551 498 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 GUCY1A2P33402 732 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SPICE1Q8N0Z3 855 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SLC26A7Q8TE54 656 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 KDM1AO60341 852 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 LIG4P49917 911 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 TBC1D22AQ8WUA7 517 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SEC16BQ96JE7 1060 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SMARCAL1Q9NZC9 954 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 STK17AQ9UEE5 414 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 PAIP2BQ9ULR5 123 aaKnown RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 PPME1Q9Y570 386 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SYNJ2BP-COX16A0A087WUM0 186 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 CCDC188H7C350 402 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 MAN1A2O60476 641 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 STX1BP61266 288 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 DRP2Q13474 957 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SLFN13Q68D06 897 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 RNF207Q6ZRF8 634 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SPATA4Q8NEY3 305 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 NRBF2Q96F24 287 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SERPINI1Q99574 410 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 TRPV6Q9H1D0 765 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 PSD3Q9NYI0 1048 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 COX16Q9P0S2 106 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 FHOD1Q9Y613 1164 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms