RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CST5P28325 142 aaPredicted RBP17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 RRAGBQ5VZM2 374 aa17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 CCSAPQ6IQ19 270 aaPredicted RBP17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 PLPPR4Q7Z2D5 763 aa17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 TRMT1LQ7Z2T5 733 aaKnown RBP17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 SMARCAD1Q9H4L7 1026 aa17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 BLOC1S4Q9NUP1 217 aa17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 FRMPD3Q5JV73 1810 aa17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 E9PMD0 336 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 ZNF202O95125 648 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 MYCNP04198 464 aaPredicted RBP17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 MYL3P08590 195 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 MARK3P27448 753 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 STAT6P42226 847 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 PRKCEQ02156 737 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 LRRC41Q15345 812 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 PIGOQ8TEQ8 1089 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 TMEM150BA6NC51 233 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 F2P00734 622 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 KCNA10Q16322 511 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 LONRF3Q496Y0 759 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 RNF180Q86T96 592 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 IQUBQ8NA54 791 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 KAT2BQ92831 832 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 NACC1Q96RE7 527 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
CCDC90B-201ENST00000260054 H3BRB1 525 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 ACTN4O43707 911 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 DKC1O60832 514 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 OATP04181 439 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 YWHABP31946 246 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 PLCB4Q15147 1175 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 ANO5Q75V66 913 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 CKAP2LQ8IYA6 745 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 RNPEPQ9H4A4 650 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 TUT1Q9H6E5 874 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 ERAP1Q9NZ08 941 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 STK17AQ9UEE5 414 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 SERTAD1Q9UHV2 236 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 DNM3Q9UQ16 869 aa17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 MYH9P35579 1960 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-201ENST00000260054 ZEB2O60315 1214 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 ASGR1P07306 291 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 SLC26A2P50443 739 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 XKR3Q5GH77 459 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 PLA2G4FQ68DD2 849 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 CXCL17Q6UXB2 119 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 KCTD17Q8N5Z5 321 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 LARP4BQ92615 738 aaKnown RBP17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 RAD54LQ92698 747 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 SH2D3AQ9BRG2 576 aa17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 PYM1Q9BRP8 204 aaKnown RBP17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 ZNF215Q9UL58 517 aaPredicted RBP17.65■□□□□ 0.42
CCDC90B-201ENST00000260054 KPNA6O60684 536 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 EYA4O95677 639 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 MBD3O95983 291 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 PTMSP20962 102 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 MCM6Q14566 821 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 KRBA2Q6ZNG9 492 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 PCSK9Q8NBP7 692 aaKnown RBP17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 ATP8B4Q8TF62 1192 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 MTRQ99707 1265 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 BHMT2Q9H2M3 363 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 SEPT9Q9UHD8 586 aaPredicted RBP17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 OGDHLQ9ULD0 1010 aa17.64■□□□□ 0.42
CCDC90B-201ENST00000260054 HAS3O00219 553 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 GJB1P08034 283 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 SLFN14P0C7P3 912 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 PLA2G4BP0C869 781 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 RARRES1P49788 294 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 NPEPPSP55786 919 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 ARRDC4Q8NCT1 418 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 U2AF1L4Q8WU68 220 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 BBXQ8WY36 941 aaPredicted RBP17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 MTG1Q9BT17 334 aaPredicted RBP17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 CRISPLD2Q9H0B8 497 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 CUEDC2Q9H467 287 aa17.64■□□□□ 0.41
CCDC90B-201ENST00000260054 SGPL1O95470 568 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 PSEN2P49810 448 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 SLC12A3P55017 1021 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 DHX8Q14562 1220 aaKnown RBP17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 MFSD10Q14728 455 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 KIAA0753Q2KHM9 967 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 CEP57L1Q8IYX8 460 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 SYT2Q8N9I0 419 aaPredicted RBP17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 CNNM3Q8NE01 707 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 PPP1R13LQ8WUF5 828 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 STAMQ92783 540 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 FAM167AQ96KS9 214 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 TIGD1Q96MW7 591 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 NIFKQ9BYG3 293 aaKnown RBP17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 NRBP2Q9NSY0 501 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 ANKEF1Q9NU02 776 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 KBTBD4Q9NVX7 518 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 USP25Q9UHP3 1055 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 DBR1Q9UK59 544 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms