RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RAVER1Q8IY67 606 aaKnown RBP8.38□□□□□ -1.07
GPNMB-201ENST00000258733 STK32AQ8WU08 396 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 KIFC2Q96AC6 838 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 ETNK2Q9NVF9 386 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 THAP1Q9NVV9 213 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 COMMD3-BMI1R4GMX3 469 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 MSH6P52701 1360 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 NDC80O14777 642 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 IFIT2P09913 472 aaKnown RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 COL6A2P12110 1019 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 NCAM1P13591 858 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 CCNFP41002 786 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 RUNX1T1Q06455 604 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 TCIRG1Q13488 830 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 ME3Q16798 604 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 TRIM65Q6PJ69 517 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 TPTE2Q6XPS3 522 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 RHOT2Q8IXI1 618 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 STKLD1Q8NE28 680 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 SLC7A3Q8WY07 619 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 PNKPQ96T60 521 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 MPHOSPH8Q99549 860 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 TBX22Q9Y458 520 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 TTC37Q6PGP7 1564 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 RNF17Q9BXT8 1623 aaKnown RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 A6NCN8 305 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 LACTBL1A8MY62 500 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 MATN2O00339 956 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 CASQ2O14958 399 aaPredicted RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 CETN3O15182 167 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 XPOTO43592 962 aaKnown RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 PDHA1P08559 390 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 GNAI3P08754 354 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 EPS15P42566 896 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 PRDM15P57071 1507 aaPredicted RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 DNM1Q05193 864 aaKnown RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 ZC3H12BQ5HYM0 836 aaKnown RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 ALS2CLQ60I27 953 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 DDX42Q86XP3 938 aaKnown RBP eCLIP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 TREML1Q86YW5 311 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 TMTC1Q8IUR5 882 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 RASEFQ8IZ41 740 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 SAMD11Q96NU1 681 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 HEPHQ9BQS7 1158 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 NIFKQ9BYG3 293 aaKnown RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 SHCBP1LQ9BZQ2 653 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 FAIMQ9NVQ4 179 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 TTF2Q9UNY4 1162 aaKnown RBP8.37□□□□□ -1.07
GPNMB-201ENST00000258733 CDC42BPBQ9Y5S2 1711 aa8.37□□□□□ -1.07
GPNMB-201ENST00000258733 MAGI2Q86UL8 1455 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 E9PMD0 336 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 FBP2O00757 339 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 TUBBP07437 444 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 HMOX2P30519 316 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 PCK1P35558 622 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 GSDMDP57764 484 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 UBE2HP62256 183 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 AKAP17AQ02040 695 aaKnown RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SEMA3AQ14563 771 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 PPP1R7Q15435 360 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 MOGQ16653 247 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 CYP4X1Q8N118 509 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 ZNF473Q8WTR7 871 aaKnown RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 NRBF2Q96F24 287 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SERINC2Q96SA4 455 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 LPIN3Q9BQK8 851 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 OSBPL7Q9BZF2 842 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 CBX8Q9HC52 389 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 NEK6Q9HC98 313 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 GMIPQ9P107 970 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 ZBTB21Q9ULJ3 1066 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 MAGEA13PA6NCF6 341 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SNTNA6NMZ2 147 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 FANCGO15287 622 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 ZFYP08048 801 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SPATA31D3P0C874 917 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 PTPN2P17706 415 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SERPINB4P48594 390 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 RELQ04864 619 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 KDSRQ06136 332 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 ANO4Q32M45 955 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 CNPY1Q3B7I2 92 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 BRDTQ58F21 947 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 C6orf132Q5T0Z8 1188 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 RASIP1Q5U651 963 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 NCAPH2Q6IBW4 605 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 TATDN1Q6P1N9 297 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SPATA31D4Q6ZUB0 917 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 RIN2Q8WYP3 895 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 KIAA1683Q9H0B3 1180 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 ATP13A3Q9H7F0 1226 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 PIH1D3Q9NQM4 214 aaKnown RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 BTBD7Q9P203 1132 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 STAG3Q9UJ98 1225 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 AGAP1Q9UPQ3 857 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 MAGED1Q9Y5V3 778 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 F8W031 263 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms