RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 CARD6Q9BX69 1037 aa18.28■□□□□ 0.52
SORT1-201ENST00000256637 TARBP1Q13395 1621 aaKnown RBP18.28■□□□□ 0.52
SORT1-201ENST00000256637 ZC3H4Q9UPT8 1303 aaKnown RBP18.27■□□□□ 0.52
SORT1-201ENST00000256637 IFNLR1Q8IU57 520 aaPredicted RBP18.27■□□□□ 0.52
SORT1-201ENST00000256637 ZNF280CQ8ND82 737 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 F5H6K3 240 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 THPOP40225 353 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 KLRC3Q07444 240 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 MMEL1Q495T6 779 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 PPP2R3CQ969Q6 453 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 INTS4Q96HW7 963 aaKnown RBP18.27■□□□□ 0.52
SORT1-201ENST00000256637 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 PPP1R12CQ9BZL4 782 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 PER1O15534 1290 aaPredicted RBP18.27■□□□□ 0.52
SORT1-201ENST00000256637 SPATA2LQ8IUW3 424 aaPredicted RBP18.27■□□□□ 0.52
SORT1-201ENST00000256637 CAPN2P17655 700 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 IRX4P78413 519 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 VEPH1Q14D04 833 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 MGAT5BQ3V5L5 792 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 APOA5Q6Q788 366 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
SORT1-201ENST00000256637 PRELPP51888 382 aa18.27■□□□□ 0.51
SORT1-201ENST00000256637 FRA10AC1Q70Z53 315 aa18.27■□□□□ 0.51
SORT1-201ENST00000256637 NUDT12Q9BQG2 462 aa18.27■□□□□ 0.51
SORT1-201ENST00000256637 CXCR5P32302 372 aa18.27■□□□□ 0.51
SORT1-201ENST00000256637 ARL13BQ3SXY8 428 aa18.27■□□□□ 0.51
SORT1-201ENST00000256637 COL23A1Q86Y22 540 aaPredicted RBP18.27■□□□□ 0.51
SORT1-201ENST00000256637 QRICH2Q9H0J4 1663 aa18.27■□□□□ 0.51
SORT1-201ENST00000256637 TECPR2O15040 1411 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 TRIM17Q9Y577 477 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 GTPBP6O43824 516 aaPredicted RBP18.26■□□□□ 0.51
SORT1-201ENST00000256637 IGSF3O75054 1194 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 CYB5R4Q7L1T6 521 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 TMEM143Q96AN5 459 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 YME1L1Q96TA2 773 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 XPO4Q9C0E2 1151 aaKnown RBP18.26■□□□□ 0.51
SORT1-201ENST00000256637 PCDHB6Q9Y5E3 794 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.26■□□□□ 0.513e-7■■■□□ 14.9
SORT1-201ENST00000256637 ARHGEF37A1IGU5 675 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 MAP3K7O43318 606 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 PFKFB2O60825 505 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 PSMA2P25787 234 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 DEPDC1BQ8WUY9 529 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 SH3KBP1Q96B97 665 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 TTC1Q99614 292 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 PPP1R13LQ8WUF5 828 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 L3MBTL3Q96JM7 780 aaPredicted RBP18.26■□□□□ 0.51
SORT1-201ENST00000256637 CPP00450 1065 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 TMEM47Q9BQJ4 181 aa18.26■□□□□ 0.51
SORT1-201ENST00000256637 SH2B2O14492 632 aaPredicted RBP18.25■□□□□ 0.51
SORT1-201ENST00000256637 SYF2O95926 243 aaKnown RBP18.25■□□□□ 0.51
SORT1-201ENST00000256637 AKR1B1P15121 316 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 PRR23CQ6ZRP0 262 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 FBXO40Q9UH90 709 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 FARP1Q9Y4F1 1045 aaPredicted RBP18.25■□□□□ 0.51
SORT1-201ENST00000256637 CFAP69A5D8W1 941 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 ZBTB5O15062 677 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 PHBP35232 272 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 CFAP221Q4G0U5 840 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 FAM76AQ8TAV0 307 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 HASPINQ8TF76 798 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 TMEM206Q9H813 350 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 STK38LQ9Y2H1 464 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 HEY1Q9Y5J3 304 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 CYP21A2P08686 494 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 ARL4DP49703 201 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 SYCP2LQ5T4T6 812 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.25■□□□□ 0.51
SORT1-201ENST00000256637 UTYO14607 1347 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 MYO1FO00160 1098 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 PRPF4O43172 522 aaKnown RBP eCLIP18.25■□□□□ 0.51
SORT1-201ENST00000256637 CETPP11597 493 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 GAP43P17677 238 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 GARSP41250 739 aaKnown RBP18.25■□□□□ 0.51
SORT1-201ENST00000256637 PDE1BQ01064 536 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 CEP128Q6ZU80 1094 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 RAB44Q7Z6P3 723 aaPredicted RBP18.25■□□□□ 0.51
SORT1-201ENST00000256637 DEFB129Q9H1M3 183 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 PDGFRBP09619 1106 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 WEE1P30291 646 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 CCDC62Q6P9F0 684 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 FANCLQ9NW38 375 aa18.25■□□□□ 0.51
SORT1-201ENST00000256637 HADHAP40939 763 aa18.24■□□□□ 0.51
SORT1-201ENST00000256637 PAK2Q13177 524 aa18.24■□□□□ 0.51
SORT1-201ENST00000256637 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.24■□□□□ 0.512e-6■■■■■ 40
SORT1-201ENST00000256637 DACT3Q96B18 629 aaPredicted RBP18.24■□□□□ 0.51
SORT1-201ENST00000256637 M0QYV0 167 aa18.24■□□□□ 0.51
SORT1-201ENST00000256637 RNF149Q8NC42 400 aa18.24■□□□□ 0.51
SORT1-201ENST00000256637 SUCLA2Q9P2R7 463 aaPredicted RBP18.24■□□□□ 0.51
SORT1-201ENST00000256637 PCDHA7Q9UN72 937 aa18.24■□□□□ 0.51
SORT1-201ENST00000256637 VCPP55072 806 aaKnown RBP18.24■□□□□ 0.51
SORT1-201ENST00000256637 MAP7D3Q8IWC1 876 aa18.24■□□□□ 0.51
SORT1-201ENST00000256637 ASIC4Q96FT7 647 aa18.24■□□□□ 0.51
SORT1-201ENST00000256637 MCF2LO15068 1137 aa18.24■□□□□ 0.51
SORT1-201ENST00000256637 CASP1P29466 404 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms