RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 CHMP4BP1P59074 171 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 ZBED6P86452 979 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 GMCL1Q96IK5 515 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 NAPGQ99747 312 aaPredicted RBP10.11□□□□□ -0.79
RPA1-201ENST00000254719 SELENOOQ9BVL4 669 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 TDRD3Q9H7E2 651 aaKnown RBP10.11□□□□□ -0.79
RPA1-201ENST00000254719 JADE2Q9NQC1 790 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 NYAP2Q9P242 653 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 IGSF9BQ9UPX0 1349 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 A0A087X0T9 212 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 F5H6K3 240 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 ATP8B1O43520 1251 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 OPA1O60313 960 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 FAM228BP0C875 321 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 SREBF1P36956 1147 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 DNM2P50570 870 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 KLRC3Q07444 240 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 TTC19Q6DKK2 380 aaPredicted RBP10.11□□□□□ -0.79
RPA1-201ENST00000254719 OTOP1Q7RTM1 612 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 USP37Q86T82 979 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 TSEN2Q8NCE0 465 aaKnown RBP10.11□□□□□ -0.79
RPA1-201ENST00000254719 SLC30A5Q8TAD4 765 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
RPA1-201ENST00000254719 DDX25Q9UHL0 483 aaKnown RBP10.11□□□□□ -0.79
RPA1-201ENST00000254719 PIK3CDO00329 1044 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 RHOXF2BP0C7M4 288 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 SMC1AQ14683 1233 aaKnown RBP10.1□□□□□ -0.79
RPA1-201ENST00000254719 HDXQ7Z353 690 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 AENQ8WTP8 325 aaKnown RBP10.1□□□□□ -0.79
RPA1-201ENST00000254719 SPAG5Q96R06 1193 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 RHOXF2Q9BQY4 288 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 TAOK3Q9H2K8 898 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 RPL13P26373 211 aaKnown RBP10.1□□□□□ -0.79
RPA1-201ENST00000254719 ADCY7P51828 1080 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 USP14P54578 494 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 BMT2Q1RMZ1 405 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 STRIP1Q5VSL9 837 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 DCAF12L1Q5VU92 463 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 IL31RAQ8NI17 732 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 CAMKK2Q96RR4 588 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 REEP2Q9BRK0 252 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 DEFB129Q9H1M3 183 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 ASTN2O75129 1339 aaPredicted RBP10.1□□□□□ -0.79
RPA1-201ENST00000254719 CCDC151A5D8V7 595 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 TULP2O00295 520 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 MEIS1O00470 390 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 MYCNP04198 464 aaPredicted RBP10.1□□□□□ -0.79
RPA1-201ENST00000254719 GTF2A1P52655 376 aaPredicted RBP10.1□□□□□ -0.79
RPA1-201ENST00000254719 CDC37Q16543 378 aaPredicted RBP10.1□□□□□ -0.79
RPA1-201ENST00000254719 GJB7Q6PEY0 223 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 C1orf186Q6ZWK4 172 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 GOLPH3Q9H4A6 298 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 RGL1Q9NZL6 768 aa10.1□□□□□ -0.79
RPA1-201ENST00000254719 SLC9A1P19634 815 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 TBC1D8BQ0IIM8 1120 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 NFRKBQ6P4R8 1299 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 PDXDC1Q6P996 788 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 SAMD1Q6SPF0 538 aaPredicted RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 ZNF571Q7Z3V5 609 aaPredicted RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 PLVAPQ9BX97 442 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 RASSF4Q9H2L5 321 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 TRAF3IP3Q9Y228 551 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 STXBP5LQ9Y2K9 1186 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 NR2E1Q9Y466 385 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 TISP43B9A030 160 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 hCG_1984214I3L0E3 225 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 STBD1O95210 358 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 HOXA13P31271 388 aaPredicted RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 EIF4A3P38919 411 aaKnown RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 AARSP49588 968 aaKnown RBP eCLIP10.09□□□□□ -0.79
RPA1-201ENST00000254719 ZNF713Q8N859 430 aaPredicted RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 CLEC4DQ8WXI8 215 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 TBC1D7Q9P0N9 293 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 MYO1AQ9UBC5 1043 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 STK17AQ9UEE5 414 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 SWAP70Q9UH65 585 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 FRMPD4Q14CM0 1322 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 POU5F1Q01860 360 aaKnown RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 EPHA7Q15375 998 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 HAUS3Q68CZ6 603 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 SYT2Q8N9I0 419 aaPredicted RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 INPP4AQ96PE3 977 aaPredicted RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 PDE11AQ9HCR9 933 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 DMAC2Q9NW81 257 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 VCANP13611 3396 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 MOCS3O95396 460 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 ITGB5P18084 799 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.79
RPA1-201ENST00000254719 BRD3Q15059 726 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 ANO3Q9BYT9 981 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 FAM207AQ9NSI2 230 aaPredicted RBP10.09□□□□□ -0.79
RPA1-201ENST00000254719 AIPL1Q9NZN9 384 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 SERPINA10Q9UK55 444 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 ADAM21Q9UKJ8 722 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 GUCA1BQ9UMX6 200 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 SNX12Q9UMY4 172 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 KIAA1024Q9UPX6 916 aa10.09□□□□□ -0.79
RPA1-201ENST00000254719 GOLGA6L7A0A1B0GV03 622 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms