RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LRGUKQ96M69 825 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 GINM1Q9NU53 330 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 IRAK4Q9NWZ3 460 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 PP2D1A8MPX8 630 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 SFR1Q86XK3 245 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 RNF139Q8WU17 664 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 GCLMP48507 274 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 SPOPLQ6IQ16 392 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 PCGF5Q86SE9 256 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 MB21D1Q8N884 522 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 SLC17A8Q8NDX2 589 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 CEP95Q96GE4 821 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 THAP9Q9H5L6 903 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 ATP7BP35670 1465 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 RPSAP08865 295 aaKnown RBP20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 EPHB1P54762 984 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 LMNB2Q03252 620 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 STAG1Q8WVM7 1258 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 OLA1Q9NTK5 396 aaKnown RBP20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 SLC16A4O15374 487 aa20.14■□□□□ 0.82
SMARCC1-201ENST00000254480 KCNQ2O43526 872 aa20.14■□□□□ 0.82
SMARCC1-201ENST00000254480 SMIM24O75264 130 aa20.14■□□□□ 0.82
SMARCC1-201ENST00000254480 ENOX1Q8TC92 643 aaKnown RBP20.14■□□□□ 0.82
SMARCC1-201ENST00000254480 TRIM11Q96F44 468 aa20.14■□□□□ 0.82
SMARCC1-201ENST00000254480 TMEM179Q6ZVK1 233 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 TMTC3Q6ZXV5 915 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 INTUQ9ULD6 942 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 SNRNP48Q6IEG0 339 aaKnown RBP20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 MRPL47Q9HD33 250 aaKnown RBP20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 MYO5CQ9NQX4 1742 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 LIFRP42702 1097 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 HABP4Q5JVS0 413 aaKnown RBP20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 PHLDB3Q6NSJ2 640 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 NOVA2Q9UNW9 492 aaKnown RBP20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 GOLGA8MH3BSY2 632 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 PRR29P0C7W0 189 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 FAM160B2Q86V87 743 aa20.14■□□□□ 0.81
SMARCC1-201ENST00000254480 PSMA2P25787 234 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 ZBED6P86452 979 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 ERICH1Q86X53 443 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 DEPDC1BQ8WUY9 529 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 DYDC2Q96IM9 177 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 SLC12A6Q9UHW9 1150 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 NEO1Q92859 1461 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 POTEB3A0JP26 581 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 ZNF233A6NK53 670 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 POTECB2RU33 542 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 POTEBQ6S5H4 581 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 PRPF38AQ8NAV1 312 aaKnown RBP20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 SPDYE1Q8NFV5 336 aaPredicted RBP20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 RNF217Q8TC41 542 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 BCAP29Q9UHQ4 241 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 TOGARAM2Q6ZUX3 1019 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 TCP11Q8WWU5 503 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 PARD6BQ9BYG5 372 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 ANXA13P27216 316 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 FOXP4Q8IVH2 680 aaPredicted RBP20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 PPWD1Q96BP3 646 aaKnown RBP20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 FAM213AQ9BRX8 229 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 GOLPH3LQ9H4A5 285 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 CD209Q9NNX6 404 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 SPATA31E1Q6ZUB1 1445 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 CTNND1O60716 968 aaKnown RBP20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 MT-ND3P03897 115 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 PLS3P13797 630 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 EPHB4P54760 987 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 RAB44Q7Z6P3 723 aaPredicted RBP20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 EXOC8Q8IYI6 725 aa20.13■□□□□ 0.81
SMARCC1-201ENST00000254480 ALKBH5Q6P6C2 394 aaKnown RBP20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 RTKN2Q8IZC4 609 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 NVLO15381 856 aaKnown RBP20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 SUN1O94901 812 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 COG7P83436 770 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 GANCQ8TET4 914 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 DNAJC12Q9UKB3 198 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 ANKARQ7Z5J8 1434 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 E2F5Q15329 346 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 MRPL46Q9H2W6 279 aaKnown RBP20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 MED4Q9NPJ6 270 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 PIM2Q9P1W9 311 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 TLK1Q9UKI8 766 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 RPS6KA4O75676 772 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 GYS2P54840 703 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 DR1Q01658 176 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 SLMAPQ14BN4 828 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 ENAHQ8N8S7 591 aaPredicted RBP20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 CPSF2Q9P2I0 782 aaKnown RBP20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 EXOC1LA0A1B0GW35 172 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 FGGP02679 453 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 NCF2P19878 526 aaPredicted RBP20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 CDC27P30260 824 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 CCDC197Q8NCU1 140 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 FGD4Q96M96 766 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 NFU1Q9UMS0 254 aa20.12■□□□□ 0.81
SMARCC1-201ENST00000254480 KDM5DQ9BY66 1539 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 CFLARO15519 480 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 ZBED1O96006 694 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 ASNSP08243 561 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 MTRQ99707 1265 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 TSR3Q9UJK0 312 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms