RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 RABGGTAQ92696 567 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 PSMB7Q99436 277 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 POLRMTO00411 1230 aaKnown RBP16.28■□□□□ 0.2
UBE4B-201ENST00000253251 BUB1O43683 1085 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 NDUFA10O95299 355 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 PRCPP42785 496 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 CPLX4Q7Z7G2 160 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 AFAP1L1Q8TED9 768 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 MTRQ99707 1265 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 IL25Q9H293 177 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 KCNK9Q9NPC2 374 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 MAP3K20Q9NYL2 800 aaKnown RBP16.28■□□□□ 0.2
UBE4B-201ENST00000253251 HPS5Q9UPZ3 1129 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 EBAG9O00559 213 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 SLC25A27O95847 323 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 CHGBP05060 677 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 TFAMQ00059 246 aaKnown RBP16.28■□□□□ 0.2
UBE4B-201ENST00000253251 KYAT1Q16773 422 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 RSAD2Q8WXG1 361 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
UBE4B-201ENST00000253251 SAMD15Q9P1V8 674 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.2
UBE4B-201ENST00000253251 ABI1Q8IZP0 508 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 TTC39CQ8N584 583 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 PBKQ96KB5 322 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 LXNQ9BS40 222 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 SNX25Q9H3E2 840 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 UBE2TQ9NPD8 197 aaPredicted RBP16.27■□□□□ 0.2
UBE4B-201ENST00000253251 CAMTA1Q9Y6Y1 1673 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 A0A1W2PQC6 194 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.2
UBE4B-201ENST00000253251 APBA1Q02410 837 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 SRGAP1Q7Z6B7 1085 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 TRIM50Q86XT4 487 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
UBE4B-201ENST00000253251 JRKLQ9Y4A0 524 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 PPP2R3BQ9Y5P8 575 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 ATP8B3O60423 1300 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 SCP2P22307 547 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 ZNF653Q96CK0 615 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 FAM163AQ96GL9 167 aaPredicted RBP16.27■□□□□ 0.2
UBE4B-201ENST00000253251 NCAPGQ9BPX3 1015 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.2
UBE4B-201ENST00000253251 ATP1A3P13637 1013 aa16.27■□□□□ 0.19
UBE4B-201ENST00000253251 KLRK1P26718 216 aa16.27■□□□□ 0.19
UBE4B-201ENST00000253251 AP3M2P53677 418 aa16.27■□□□□ 0.19
UBE4B-201ENST00000253251 GPIHBP1Q8IV16 184 aa16.27■□□□□ 0.19
UBE4B-201ENST00000253251 BANK1Q8NDB2 785 aa16.27■□□□□ 0.19
UBE4B-201ENST00000253251 RIT2Q99578 217 aa16.27■□□□□ 0.19
UBE4B-201ENST00000253251 JMJD4Q9H9V9 463 aa16.27■□□□□ 0.19
UBE4B-201ENST00000253251 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.19
UBE4B-201ENST00000253251 EIF4A3P38919 411 aaKnown RBP16.26■□□□□ 0.19
UBE4B-201ENST00000253251 CHST13Q8NET6 341 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 PFASO15067 1338 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 HOXD10P28358 340 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
UBE4B-201ENST00000253251 RHOT2Q8IXI1 618 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 AGXT2Q9BYV1 514 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 TRIM31Q9BZY9 425 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 TOPORSQ9NS56 1045 aaPredicted RBP16.26■□□□□ 0.19
UBE4B-201ENST00000253251 GABBR1Q9UBS5 961 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 SLC9A2Q9UBY0 812 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 ABCC6O95255 1503 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 SMIM23A6NLE4 172 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 COBLO75128 1261 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 SNAPC2Q13487 334 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 PNMA8AQ86V59 439 aaPredicted RBP16.26■□□□□ 0.19
UBE4B-201ENST00000253251 SLC35F6Q8N357 371 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 PDXKO00764 312 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 CTDNEP1O95476 244 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 CDC42EP1Q00587 391 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 FAM133AQ8N9E0 248 aa16.26■□□□□ 0.19
UBE4B-201ENST00000253251 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
UBE4B-201ENST00000253251 PASKQ96RG2 1323 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 POTEFA5A3E0 1075 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 CLDN3O15551 220 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 ITIH3Q06033 890 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 POTEGQ6S5H5 508 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 POTEEQ6S8J3 1075 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 RDM1Q8NG50 284 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 TRIM9Q9C026 710 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 DEFB129Q9H1M3 183 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 HOMER3Q9NSC5 361 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 GGA3Q9NZ52 723 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 TCRBV5S4A2TA0A5A2 114 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 EFNA5P52803 228 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 DENND2CQ68D51 928 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 RINT1Q6NUQ1 792 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 A0A087WWV3 80 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 GFPT2O94808 682 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 MAPK4P31152 587 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■■□□ 17.2
UBE4B-201ENST00000253251 ZBTB16Q05516 673 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 ENOSF1Q7L5Y1 443 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 SHPRHQ149N8 1683 aa16.25■□□□□ 0.19
UBE4B-201ENST00000253251 SRGAP2CP0DJJ0 459 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms