RNA–Protein interactions for RNA: ENST00000253008.2

PRDM12-201, Transcript of PR/SET domain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM12, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12-201ENST00000253008 ARMCX3Q9UH62 379 aaPredicted RBP20.05■□□□□ 0.8
PRDM12-201ENST00000253008 DNM3Q9UQ16 869 aa20.05■□□□□ 0.8
PRDM12-201ENST00000253008 NDUFB10O96000 172 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 SYT2Q8N9I0 419 aaPredicted RBP20.04■□□□□ 0.8
PRDM12-201ENST00000253008 CASKIN2Q8WXE0 1202 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 SH3GL2Q99962 352 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 NUCKS1Q9H1E3 243 aaKnown RBP20.04■□□□□ 0.8
PRDM12-201ENST00000253008 ASTN1O14525 1302 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 EDRF1Q3B7T1 1238 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 SLFN12Q8IYM2 578 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 MKL1Q969V6 931 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 CCDC17Q96LX7 622 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 SPAG5Q96R06 1193 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 TRPC5Q9UL62 973 aaPredicted RBP20.04■□□□□ 0.8
PRDM12-201ENST00000253008 PCDHB13Q9Y5F0 798 aa20.04■□□□□ 0.8
PRDM12-201ENST00000253008 KCNK3O14649 394 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 RPA1P27694 616 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 IRAK1P51617 712 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 UBXN2AP68543 259 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 CTTNQ14247 550 aaKnown RBP20.03■□□□□ 0.8
PRDM12-201ENST00000253008 EXOC3L4Q17RC7 722 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 EPM2AIP1Q7L775 607 aaPredicted RBP20.03■□□□□ 0.8
PRDM12-201ENST00000253008 CCDC43Q96MW1 224 aaKnown RBP20.03■□□□□ 0.8
PRDM12-201ENST00000253008 GDF3Q9NR23 364 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 RAD51CO43502 376 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 GCNT3O95395 438 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 AFPP02771 609 aaKnown RBP20.03■□□□□ 0.8
PRDM12-201ENST00000253008 ZC2HC1CQ53FD0 456 aaPredicted RBP20.03■□□□□ 0.8
PRDM12-201ENST00000253008 AMNQ9BXJ7 453 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 NYAP2Q9P242 653 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 TRAF3IP3Q9Y228 551 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 GREB1LQ9C091 1923 aaPredicted RBP20.03■□□□□ 0.8
PRDM12-201ENST00000253008 PITPNM2Q9BZ72 1349 aa20.03■□□□□ 0.8
PRDM12-201ENST00000253008 A0A1W2PRG0 241 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 CHMP2AO43633 222 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 NOP2P46087 812 aaKnown RBP20.02■□□□□ 0.8
PRDM12-201ENST00000253008 COG2Q14746 738 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 FBXO11Q86XK2 927 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 DCAF4Q8WV16 495 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 SIX2Q9NPC8 291 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 VAV3Q9UKW4 847 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 SPDYE3A6NKU9 549 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 NMT1P30419 496 aaKnown RBP20.02■□□□□ 0.8
PRDM12-201ENST00000253008 EPHA7Q15375 998 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 EMBQ6PCB8 327 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 PIK3R5Q8WYR1 880 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 ZDHHC15Q96MV8 337 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 EIF2AK1Q9BQI3 630 aaKnown RBP20.02■□□□□ 0.8
PRDM12-201ENST00000253008 AP1M1Q9BXS5 423 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 QTRT2Q9H974 415 aaKnown RBP20.02■□□□□ 0.8
PRDM12-201ENST00000253008 PI4KBQ9UBF8 816 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 SIPA1L1O43166 1804 aa20.02■□□□□ 0.8
PRDM12-201ENST00000253008 LRRC37AA6NMS7 1700 aa20.02■□□□□ 0.79
PRDM12-201ENST00000253008 ZNF233A6NK53 670 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 ONECUT3O60422 494 aaPredicted RBP20.01■□□□□ 0.79
PRDM12-201ENST00000253008 SHOX2O60902 331 aaPredicted RBP20.01■□□□□ 0.79
PRDM12-201ENST00000253008 NR3C1P04150 777 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 XRCC5P13010 732 aaKnown RBP20.01■□□□□ 0.79
PRDM12-201ENST00000253008 ATP1A2P50993 1020 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 CAVIN3Q969G5 261 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 NAGPAQ9UK23 515 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 PPFIA4O75335 1185 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 GH2P01242 217 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 Q4G0T1 1027 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 KIAA1755Q5JYT7 1200 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 ALKBH5Q6P6C2 394 aaKnown RBP20.01■□□□□ 0.79
PRDM12-201ENST00000253008 DDX42Q86XP3 938 aaKnown RBP eCLIP20.01■□□□□ 0.79
PRDM12-201ENST00000253008 USP38Q8NB14 1042 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 SLC35C1Q96A29 364 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 TDRD3Q9H7E2 651 aaKnown RBP20.01■□□□□ 0.79
PRDM12-201ENST00000253008 BCS1LQ9Y276 419 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 GRIN2DO15399 1336 aa20.01■□□□□ 0.79
PRDM12-201ENST00000253008 SREBF1P36956 1147 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 GNGT1P63211 74 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 AP3B2Q13367 1082 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 SYDE2Q5VT97 1194 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 MSL1Q68DK7 614 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 SAMD1Q6SPF0 538 aaPredicted RBP20■□□□□ 0.79
PRDM12-201ENST00000253008 ARHGAP27Q6ZUM4 889 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 FRMD5Q7Z6J6 570 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 IFT20Q8IY31 132 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 ZNF622Q969S3 477 aaKnown RBP eCLIP20■□□□□ 0.79
PRDM12-201ENST00000253008 NAP1L4Q99733 375 aaKnown RBP20■□□□□ 0.79
PRDM12-201ENST00000253008 TSKSQ9UJT2 592 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 UTRNP46939 3433 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 ANKRD31Q8N7Z5 1873 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 TGFB1I1O43294 461 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 HSF2BPO75031 334 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 CCT5P48643 541 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 CAPS2Q9BXY5 557 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 GCNT4Q9P109 453 aa20■□□□□ 0.79
PRDM12-201ENST00000253008 FRMD4AQ9P2Q2 1039 aaPredicted RBP20■□□□□ 0.79
PRDM12-201ENST00000253008 ECE1P42892 770 aa19.99■□□□□ 0.79
PRDM12-201ENST00000253008 ABCB5Q2M3G0 1257 aa19.99■□□□□ 0.79
PRDM12-201ENST00000253008 TATDN1Q6P1N9 297 aa19.99■□□□□ 0.79
PRDM12-201ENST00000253008 TPH2Q8IWU9 490 aa19.99■□□□□ 0.79
PRDM12-201ENST00000253008 WDR18Q9BV38 432 aa19.99■□□□□ 0.79
PRDM12-201ENST00000253008 RASSF4Q9H2L5 321 aa19.99■□□□□ 0.79
PRDM12-201ENST00000253008 LUC7LQ9NQ29 371 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms