RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 PNKPQ96T60 521 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 RHOXF2Q9BQY4 288 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 MXRA8Q9BRK3 442 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 MLXIPQ9HAP2 919 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 OLFML3Q9NRN5 406 aa23.86■■□□□ 1.41
CLN6-201ENST00000249806 TYW1Q9NV66 732 aaKnown RBP23.86■■□□□ 1.41
CLN6-201ENST00000249806 FER1L6Q2WGJ9 1857 aa23.85■■□□□ 1.41
CLN6-201ENST00000249806 USO1O60763 962 aaKnown RBP23.85■■□□□ 1.41
CLN6-201ENST00000249806 FAM13AO94988 1023 aa23.85■■□□□ 1.41
CLN6-201ENST00000249806 TDRD12Q587J7 1177 aaKnown RBP23.85■■□□□ 1.41
CLN6-201ENST00000249806 SFMBT2Q5VUG0 894 aa23.85■■□□□ 1.41
CLN6-201ENST00000249806 FRMD5Q7Z6J6 570 aa23.85■■□□□ 1.41
CLN6-201ENST00000249806 IL31RAQ8NI17 732 aa23.85■■□□□ 1.41
CLN6-201ENST00000249806 WDR11Q9BZH6 1224 aa23.85■■□□□ 1.41
CLN6-201ENST00000249806 TSGA10Q9BZW7 698 aa23.85■■□□□ 1.41
CLN6-201ENST00000249806 HOMER2Q9NSB8 354 aa23.85■■□□□ 1.41
CLN6-201ENST00000249806 NR3C1P04150 777 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 SETQ01105 290 aaPredicted RBP23.84■■□□□ 1.41
CLN6-201ENST00000249806 TNIP1Q15025 636 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 B3GNT9Q6UX72 402 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 KSR1Q8IVT5 923 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 SMAP1Q8IYB5 467 aaPredicted RBP23.84■■□□□ 1.41
CLN6-201ENST00000249806 BANK1Q8NDB2 785 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 TEKT3Q9BXF9 490 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 DEFB129Q9H1M3 183 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 RAVER2Q9HCJ3 691 aaKnown RBP23.84■■□□□ 1.41
CLN6-201ENST00000249806 CAPN6Q9Y6Q1 641 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 TGFB1I1O43294 461 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 ACTN1P12814 892 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 ALAS1P13196 640 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 MAGEA1P43355 309 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 ARID5AQ03989 594 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 ANKRD13CQ8N6S4 541 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 CAPZA3Q96KX2 299 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 NACC1Q96RE7 527 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 ST7Q9NRC1 585 aa23.84■■□□□ 1.41
CLN6-201ENST00000249806 WDR46O15213 610 aaKnown RBP23.83■■□□□ 1.41
CLN6-201ENST00000249806 SASH3O75995 380 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 TBC1D8O95759 1140 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 GAP43P17677 238 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 SLC9A1P19634 815 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 ZNF280AP59817 542 aaPredicted RBP23.83■■□□□ 1.41
CLN6-201ENST00000249806 MAPK8IP2Q13387 824 aaPredicted RBP23.83■■□□□ 1.41
CLN6-201ENST00000249806 EPHA7Q15375 998 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 SLC9C1Q4G0N8 1177 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 ARHGAP27Q6ZUM4 889 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 UBE2Q2Q8WVN8 375 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 MMS19Q96T76 1030 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 LXNQ9BS40 222 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 ARFGAP3Q9NP61 516 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 KCNH7Q9NS40 1196 aa23.83■■□□□ 1.41
CLN6-201ENST00000249806 SSU72P8A0A1W2PR75 194 aa23.83■■□□□ 1.4
CLN6-201ENST00000249806 ZNF185O15231 689 aa23.83■■□□□ 1.4
CLN6-201ENST00000249806 MOCS3O95396 460 aa23.83■■□□□ 1.4
CLN6-201ENST00000249806 MUM1L1Q5H9M0 696 aa23.83■■□□□ 1.4
CLN6-201ENST00000249806 DCAF17Q5H9S7 520 aaPredicted RBP23.83■■□□□ 1.4
CLN6-201ENST00000249806 GANQ9H2C0 597 aa23.83■■□□□ 1.4
CLN6-201ENST00000249806 PARVGQ9HBI0 331 aa23.83■■□□□ 1.4
CLN6-201ENST00000249806 SALL4Q9UJQ4 1053 aa23.83■■□□□ 1.4
CLN6-201ENST00000249806 PLA2G4AP47712 749 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 RAPGEF1Q13905 1077 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 ENOX2Q16206 610 aaKnown RBP23.82■■□□□ 1.4
CLN6-201ENST00000249806 TBC1D10BQ4KMP7 808 aaPredicted RBP23.82■■□□□ 1.4
CLN6-201ENST00000249806 MSANTD4Q8NCY6 345 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 LPAR1Q92633 364 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 SYN2Q92777 582 aaPredicted RBP23.82■■□□□ 1.4
CLN6-201ENST00000249806 KIAA1683Q9H0B3 1180 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 NUCKS1Q9H1E3 243 aaKnown RBP23.82■■□□□ 1.4
CLN6-201ENST00000249806 PCDHB13Q9Y5F0 798 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 AFPP02771 609 aaKnown RBP23.82■■□□□ 1.4
CLN6-201ENST00000249806 SERPING1P05155 500 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 XRCC5P13010 732 aaKnown RBP23.82■■□□□ 1.4
CLN6-201ENST00000249806 RASSF7Q02833 373 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 TNFAIP1Q13829 316 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 TCERG1LQ5VWI1 586 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 FAM133AQ8N9E0 248 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 DRC1Q96MC2 740 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 FIZ1Q96SL8 496 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 JADE2Q9NQC1 790 aa23.82■■□□□ 1.4
CLN6-201ENST00000249806 ZMYM2Q9UBW7 1377 aa23.81■■□□□ 1.4
CLN6-201ENST00000249806 CCDC151A5D8V7 595 aa23.81■■□□□ 1.4
CLN6-201ENST00000249806 FLOT1O75955 427 aa23.81■■□□□ 1.4
CLN6-201ENST00000249806 RPL13P26373 211 aaKnown RBP23.81■■□□□ 1.4
CLN6-201ENST00000249806 DPY19L2P1Q6NXN4 242 aa23.81■■□□□ 1.4
CLN6-201ENST00000249806 MICALL2Q8IY33 904 aa23.81■■□□□ 1.4
CLN6-201ENST00000249806 SLC38A10Q9HBR0 1119 aa23.81■■□□□ 1.4
CLN6-201ENST00000249806 RPTORQ8N122 1335 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 ANO9A1A5B4 782 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 MTMR2Q13614 643 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 COG2Q14746 738 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 TRIM58Q8NG06 486 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 RIT2Q99578 217 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 FRMPD4Q14CM0 1322 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 CTNND1O60716 968 aaKnown RBP23.8■■□□□ 1.4
CLN6-201ENST00000249806 GMPSP49915 693 aaPredicted RBP23.8■■□□□ 1.4
CLN6-201ENST00000249806 TUBB4BP68371 445 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 MRPS9P82933 396 aaKnown RBP23.8■■□□□ 1.4
CLN6-201ENST00000249806 NBPF12Q5TAG4 269 aaPredicted RBP23.8■■□□□ 1.4
CLN6-201ENST00000249806 ZNF720Q7Z2F6 126 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 HACL1Q9UJ83 578 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms