RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ZC2HC1CQ53FD0 456 aaPredicted RBP13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 SYDE2Q5VT97 1194 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 HGSNATQ68CP4 663 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 SP8Q8IXZ3 490 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 PURBQ96QR8 312 aaKnown RBP13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 TMOD2Q9NZR1 351 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 FAM153AQ9UHL3 310 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 NDUFB10O96000 172 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 BMP3P12645 472 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 ZIM3Q96PE6 472 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 CSRNP1Q96S65 589 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 SH2D3AQ9BRG2 576 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 GOLGA8KD6RF30 607 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 NOL4O94818 638 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 HNRNPH3P31942 346 aaKnown RBP13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 LRCH2Q5VUJ6 765 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 ZBTB39O15060 712 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 EXOC3O60645 756 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 GAS7O60861 476 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 TRIM49P0CI25 452 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 TRIM49CP0CI26 452 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 KRT13P13646 458 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 STAT1P42224 750 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 NAB2Q15742 525 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 FAM186BQ8IYM0 893 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 AENQ8WTP8 325 aaKnown RBP13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 CCDC88AQ3V6T2 1871 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 RAD51CO43502 376 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 EDIL3O43854 480 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 AKAP3O75969 853 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 MMP10P09238 476 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 ADRA2BP18089 450 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 USP11P51784 963 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 APOBEC3HQ6NTF7 200 aaKnown RBP13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 FAM178BQ8IXR5 827 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 CRAMP1Q96RY5 1269 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 RUSC1Q9BVN2 902 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 EDEM3Q9BZQ6 932 aa13.78□□□□□ -0.2
RAB3IP-201ENST00000247833 FAM86B1E9PN63 330 aa13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 FAM86B2P0C5J1 330 aa13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 ODR4Q5SWX8 454 aa13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 ZNF571Q7Z3V5 609 aaPredicted RBP13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 EIF2AK1Q9BQI3 630 aaKnown RBP13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 PCIF1Q9H4Z3 704 aa13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 PPANQ9NQ55 473 aaKnown RBP13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 PODXL2Q9NZ53 605 aa13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 FRMD4BQ9Y2L6 1034 aa13.77□□□□□ -0.2
RAB3IP-201ENST00000247833 AGPSO00116 658 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 ATP2C2O75185 946 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 IRAK1P51617 712 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 GIT2Q14161 759 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 CRY2Q49AN0 593 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 ARSHQ5FYA8 562 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 ZNF662Q6ZS27 426 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 GLYCTKQ8IVS8 523 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 OR2W6PQ8NHA6 318 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 CTNNBL1Q8WYA6 563 aaPredicted RBP13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 DYDC2Q96IM9 177 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 TLDC2A0PJX2 215 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 TTC31Q49AM3 519 aaPredicted RBP13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 C15orf52Q6ZUT6 534 aaKnown RBP13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 HOMER2Q9NSB8 354 aa13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
RAB3IP-201ENST00000247833 ABCB11O95342 1321 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 GRID2IPA4D2P6 1211 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 SNHG28P0DPA3 235 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 TNFAIP3P21580 790 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 ALDH1B1P30837 517 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 GUCY1A3Q02108 690 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 RGL2O15211 777 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 CTNNA1P35221 906 aaKnown RBP13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 CPXCR1Q8N123 301 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 LMBR1Q8WVP7 490 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 CCDC113Q9H0I3 377 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 AMACRQ9UHK6 382 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 MSH4O15457 936 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 ZCWPW2Q504Y3 356 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 UHMK1Q8TAS1 419 aaKnown RBP13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 CASKIN2Q8WXE0 1202 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 CEP89Q96ST8 783 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 PLAAQ9Y263 795 aa13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 CTDP1Q9Y5B0 961 aaPredicted RBP13.76□□□□□ -0.21
RAB3IP-201ENST00000247833 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 POLRMTO00411 1230 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 MEIS2O14770 477 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 PRLRP16471 622 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 IBSPP21815 317 aaPredicted RBP13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 PON1P27169 355 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 AP3B2Q13367 1082 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 DCAF4Q8WV16 495 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 METTL14Q9HCE5 456 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 CHORDC1Q9UHD1 332 aaPredicted RBP13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 PGRMC1O00264 195 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 PJA2O43164 708 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 KIF4AO95239 1232 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 FOSP01100 380 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms