RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 TEPSINQ96N21 525 aa16.64■□□□□ 0.25
DDX49-201ENST00000247003 ALS2CR12Q96Q35 445 aa16.64■□□□□ 0.25
DDX49-201ENST00000247003 NLRC4Q9NPP4 1024 aa16.64■□□□□ 0.25
DDX49-201ENST00000247003 PCDHA13Q9Y5I0 950 aa16.64■□□□□ 0.25
DDX49-201ENST00000247003 ZNF536O15090 1300 aa16.64■□□□□ 0.25
DDX49-201ENST00000247003 DOCK1Q14185 1865 aa16.64■□□□□ 0.25
DDX49-201ENST00000247003 MACROD2A1Z1Q3 448 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 ARHGEF35A5YM69 484 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 ZBED4O75132 1171 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 TACC1O75410 805 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 LCA5LO95447 670 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 AFPP02771 609 aaKnown RBP16.63■□□□□ 0.25
DDX49-201ENST00000247003 NR3C1P04150 777 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 SERPING1P05155 500 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 PLEKP08567 350 aaPredicted RBP16.63■□□□□ 0.25
DDX49-201ENST00000247003 POLR2FP61218 127 aaKnown RBP16.63■□□□□ 0.25
DDX49-201ENST00000247003 CKAP4Q07065 602 aaKnown RBP16.63■□□□□ 0.25
DDX49-201ENST00000247003 MIER3Q7Z3K6 550 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 LXNQ9BS40 222 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
DDX49-201ENST00000247003 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 SAR1BQ9Y6B6 198 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 NFIBO00712 420 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 FDX1P10109 184 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 GMPSP49915 693 aaPredicted RBP16.63■□□□□ 0.25
DDX49-201ENST00000247003 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
DDX49-201ENST00000247003 DCAF17Q5H9S7 520 aaPredicted RBP16.63■□□□□ 0.25
DDX49-201ENST00000247003 C1orf186Q6ZWK4 172 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 TRAPPC11Q7Z392 1133 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 TCEAL9Q9UHQ7 104 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 HACL1Q9UJ83 578 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 GJA3Q9Y6H8 435 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 ASTN1O14525 1302 aa16.63■□□□□ 0.25
DDX49-201ENST00000247003 DDX39AO00148 427 aaKnown RBP16.62■□□□□ 0.25
DDX49-201ENST00000247003 AMPD2Q01433 879 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 GHRHRQ02643 423 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 MTMR2Q13614 643 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 RAPGEF1Q13905 1077 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 TCERG1LQ5VWI1 586 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 PCNX4Q63HM2 1172 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 HS2ST1Q7LGA3 356 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 ZFP91Q96JP5 570 aaPredicted RBP16.62■□□□□ 0.25
DDX49-201ENST00000247003 CCDC43Q96MW1 224 aaKnown RBP16.62■□□□□ 0.25
DDX49-201ENST00000247003 PURBQ96QR8 312 aaKnown RBP16.62■□□□□ 0.25
DDX49-201ENST00000247003 CRACR2AQ9BSW2 395 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 LACRTQ9GZZ8 138 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 RAVER2Q9HCJ3 691 aaKnown RBP16.62■□□□□ 0.25
DDX49-201ENST00000247003 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 PPP1R9AQ9ULJ8 1098 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 TFR2Q9UP52 801 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 LTBP3Q9NS15 1303 aa16.62■□□□□ 0.25
DDX49-201ENST00000247003 ENC1O14682 589 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 VCAM1P19320 739 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 MAGEA1P43355 309 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 TBC1D10BQ4KMP7 808 aaPredicted RBP16.61■□□□□ 0.25
DDX49-201ENST00000247003 SLC30A10Q6XR72 485 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 CLEC4DQ8WXI8 215 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 RPGRIP1Q96KN7 1286 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 PARD6BQ9BYG5 372 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 ARFGAP3Q9NP61 516 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 KCNH7Q9NS40 1196 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 CNOT7Q9UIV1 285 aaKnown RBP16.61■□□□□ 0.25
DDX49-201ENST00000247003 RCCD1A6NED2 376 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 ATP8B1O43520 1251 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 ERLIN1O75477 346 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 EGFRP00533 1210 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 ATP1A1P05023 1023 aaKnown RBP16.61■□□□□ 0.25
DDX49-201ENST00000247003 TUBBP07437 444 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 MTMR1Q13613 665 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 BRD3Q15059 726 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 ASIC2Q16515 512 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 PAPD7Q5XG87 772 aaKnown RBP16.61■□□□□ 0.25
DDX49-201ENST00000247003 IQCEQ6IPM2 695 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 BANK1Q8NDB2 785 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 GOLGA5Q8TBA6 731 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 CAGE1Q8TC20 777 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 RPAP3Q9H6T3 665 aaPredicted RBP16.61■□□□□ 0.25
DDX49-201ENST00000247003 PICK1Q9NRD5 415 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 ZNF446Q9NWS9 450 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 PKD2L1Q9P0L9 805 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 SAMM50Q9Y512 469 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 PCDHB13Q9Y5F0 798 aa16.61■□□□□ 0.25
DDX49-201ENST00000247003 CCDC151A5D8V7 595 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 ZNF263O14978 683 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 NOL4O94818 638 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 P4HBP07237 508 aaKnown RBP16.6■□□□□ 0.25
DDX49-201ENST00000247003 ITGB5P18084 799 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 GUCY2CP25092 1073 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 HOXD13P35453 343 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 NFIL3Q16649 462 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 EXOC3L4Q17RC7 722 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 ODR4Q5SWX8 454 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 B3GNT9Q6UX72 402 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 SAMD7Q7Z3H4 446 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms