RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 MMRN2Q9H8L6 949 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 PKD2L1Q9P0L9 805 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 WRAP73Q9P2S5 460 aaPredicted RBP25.66■■□□□ 1.7
MSX2-201ENST00000239243 RIPK3Q9Y572 518 aa25.66■■□□□ 1.7
MSX2-201ENST00000239243 LZTFL1Q9NQ48 299 aa25.65■■□□□ 1.7
MSX2-201ENST00000239243 MAFGO15525 162 aa25.65■■□□□ 1.7
MSX2-201ENST00000239243 PRPF6O94906 941 aaKnown RBP25.65■■□□□ 1.7
MSX2-201ENST00000239243 MAP3K9P80192 1104 aa25.65■■□□□ 1.7
MSX2-201ENST00000239243 FRMD5Q7Z6J6 570 aa25.65■■□□□ 1.7
MSX2-201ENST00000239243 ACRBPQ8NEB7 543 aa25.65■■□□□ 1.7
MSX2-201ENST00000239243 DBR1Q9UK59 544 aaKnown RBP25.65■■□□□ 1.7
MSX2-201ENST00000239243 SAMM50Q9Y512 469 aa25.65■■□□□ 1.7
MSX2-201ENST00000239243 LYPLA2O95372 231 aa25.64■■□□□ 1.7
MSX2-201ENST00000239243 HNRNPH3P31942 346 aaKnown RBP25.64■■□□□ 1.7
MSX2-201ENST00000239243 JAK3P52333 1124 aa25.64■■□□□ 1.7
MSX2-201ENST00000239243 KRT83P78385 493 aa25.64■■□□□ 1.7
MSX2-201ENST00000239243 SULF1Q8IWU6 871 aa25.64■■□□□ 1.7
MSX2-201ENST00000239243 NEK11Q8NG66 645 aa25.64■■□□□ 1.7
MSX2-201ENST00000239243 ACAD9Q9H845 621 aa25.64■■□□□ 1.7
MSX2-201ENST00000239243 RNF181Q9P0P0 153 aa25.64■■□□□ 1.7
MSX2-201ENST00000239243 SFNP31947 248 aa25.64■■□□□ 1.69
MSX2-201ENST00000239243 QARSP47897 775 aaKnown RBP25.64■■□□□ 1.69
MSX2-201ENST00000239243 KRT76Q01546 638 aa25.64■■□□□ 1.69
MSX2-201ENST00000239243 TMEM132BQ14DG7 1078 aa25.64■■□□□ 1.69
MSX2-201ENST00000239243 NLRX1Q86UT6 975 aa25.64■■□□□ 1.69
MSX2-201ENST00000239243 GPRASP2Q96D09 838 aa25.64■■□□□ 1.69
MSX2-201ENST00000239243 FAM207AQ9NSI2 230 aaPredicted RBP25.64■■□□□ 1.69
MSX2-201ENST00000239243 MYO1AQ9UBC5 1043 aa25.64■■□□□ 1.69
MSX2-201ENST00000239243 PLAGL2Q9UPG8 496 aa25.64■■□□□ 1.69
MSX2-201ENST00000239243 POLR2AP24928 1970 aaKnown RBP25.63■■□□□ 1.69
MSX2-201ENST00000239243 ZBTB39O15060 712 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 PPP1R12BO60237 982 aaPredicted RBP25.63■■□□□ 1.69
MSX2-201ENST00000239243 IPO7O95373 1038 aaKnown RBP25.63■■□□□ 1.69
MSX2-201ENST00000239243 HOXD13P35453 343 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 NSUN6Q8TEA1 469 aaKnown RBP25.63■■□□□ 1.69
MSX2-201ENST00000239243 ZNF215Q9UL58 517 aaPredicted RBP25.63■■□□□ 1.69
MSX2-201ENST00000239243 WDR90Q96KV7 1748 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 SLC16A3O15427 465 aaKnown RBP25.63■■□□□ 1.69
MSX2-201ENST00000239243 PRKG1Q13976 671 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 VSIG10LQ86VR7 867 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 FAM178BQ8IXR5 827 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 RDM1Q8NG50 284 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 TSC1Q92574 1164 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 METTL14Q9HCE5 456 aaKnown RBP25.63■■□□□ 1.69
MSX2-201ENST00000239243 CSADQ9Y600 493 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 SNCAIPQ9Y6H5 919 aa25.63■■□□□ 1.69
MSX2-201ENST00000239243 TESPA1A2RU30 521 aaPredicted RBP25.62■■□□□ 1.69
MSX2-201ENST00000239243 WDR64B1ANS9 1081 aa25.62■■□□□ 1.69
MSX2-201ENST00000239243 URI1O94763 535 aaPredicted RBP25.62■■□□□ 1.69
MSX2-201ENST00000239243 VGLL4Q14135 290 aa25.62■■□□□ 1.69
MSX2-201ENST00000239243 NFIL3Q16649 462 aa25.62■■□□□ 1.69
MSX2-201ENST00000239243 WDR24Q96S15 920 aa25.62■■□□□ 1.69
MSX2-201ENST00000239243 MAP7D2Q96T17 732 aa25.62■■□□□ 1.69
MSX2-201ENST00000239243 NUCKS1Q9H1E3 243 aaKnown RBP25.62■■□□□ 1.69
MSX2-201ENST00000239243 ARMCX3Q9UH62 379 aaPredicted RBP25.62■■□□□ 1.69
MSX2-201ENST00000239243 NR3C2P08235 984 aa25.61■■□□□ 1.69
MSX2-201ENST00000239243 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.61■■□□□ 1.69
MSX2-201ENST00000239243 ASTN1O14525 1302 aa25.61■■□□□ 1.69
MSX2-201ENST00000239243 SPDYE16A6NNV3 312 aaPredicted RBP25.61■■□□□ 1.69
MSX2-201ENST00000239243 SFI1A8K8P3 1242 aa25.61■■□□□ 1.69
MSX2-201ENST00000239243 STAM2O75886 525 aa25.61■■□□□ 1.69
MSX2-201ENST00000239243 NR3C1P04150 777 aa25.61■■□□□ 1.69
MSX2-201ENST00000239243 PADI6Q6TGC4 694 aa25.61■■□□□ 1.69
MSX2-201ENST00000239243 PCDHB13Q9Y5F0 798 aa25.61■■□□□ 1.69
MSX2-201ENST00000239243 ERCC3P19447 782 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 RBM10P98175 930 aaKnown RBP25.6■■□□□ 1.69
MSX2-201ENST00000239243 ODR4Q5SWX8 454 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 ZNF720Q7Z2F6 126 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 CACNA2D4Q7Z3S7 1137 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 TIPINQ9BVW5 301 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 NHEJ1Q9H9Q4 299 aaPredicted RBP25.6■■□□□ 1.69
MSX2-201ENST00000239243 EIF3CLB5ME19 914 aaKnown RBP25.6■■□□□ 1.69
MSX2-201ENST00000239243 FANCGO15287 622 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 EPB41P11171 864 aaKnown RBP25.6■■□□□ 1.69
MSX2-201ENST00000239243 ZNF662Q6ZS27 426 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 C4orf19Q8IY42 314 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 CDHR1Q96JP9 859 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 CCDC43Q96MW1 224 aaKnown RBP25.6■■□□□ 1.69
MSX2-201ENST00000239243 INPP4AQ96PE3 977 aaPredicted RBP25.6■■□□□ 1.69
MSX2-201ENST00000239243 EIF3CQ99613 913 aaKnown RBP25.6■■□□□ 1.69
MSX2-201ENST00000239243 HAUS4Q9H6D7 363 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 CEP72Q9P209 647 aa25.6■■□□□ 1.69
MSX2-201ENST00000239243 NMT1P30419 496 aaKnown RBP25.59■■□□□ 1.69
MSX2-201ENST00000239243 NCBP1Q09161 790 aaKnown RBP25.59■■□□□ 1.69
MSX2-201ENST00000239243 KCNMA1Q12791 1236 aa25.59■■□□□ 1.69
MSX2-201ENST00000239243 GOLGA5Q8TBA6 731 aa25.59■■□□□ 1.69
MSX2-201ENST00000239243 SMCR8Q8TEV9 937 aaPredicted RBP25.59■■□□□ 1.69
MSX2-201ENST00000239243 ANKRD7Q92527 254 aa25.59■■□□□ 1.69
MSX2-201ENST00000239243 CYP39A1Q9NYL5 469 aa25.59■■□□□ 1.69
MSX2-201ENST00000239243 LARSQ9P2J5 1176 aaKnown RBP25.59■■□□□ 1.69
MSX2-201ENST00000239243 IREB2P48200 963 aaKnown RBP25.59■■□□□ 1.69
MSX2-201ENST00000239243 PSMC5P62195 406 aa25.59■■□□□ 1.69
MSX2-201ENST00000239243 ALCAMQ13740 583 aa25.59■■□□□ 1.69
MSX2-201ENST00000239243 ZNF746Q6NUN9 644 aaPredicted RBP25.59■■□□□ 1.69
MSX2-201ENST00000239243 HS2ST1Q7LGA3 356 aa25.59■■□□□ 1.69
MSX2-201ENST00000239243 FIZ1Q96SL8 496 aa25.59■■□□□ 1.69
MSX2-201ENST00000239243 PAPPA2Q9BXP8 1791 aa25.58■■□□□ 1.69
MSX2-201ENST00000239243 HIP1RO75146 1068 aa25.58■■□□□ 1.69
MSX2-201ENST00000239243 MAPTP10636 758 aaKnown RBP25.58■■□□□ 1.69
MSX2-201ENST00000239243 XRCC5P13010 732 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms