RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 AMPD3Q01432 767 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 DHX8Q14562 1220 aaKnown RBP10.92□□□□□ -0.66
TTC1-201ENST00000231238 Q4G0T1 1027 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 HAUS3Q68CZ6 603 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 NCAPH2Q6IBW4 605 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 LYSMD3Q7Z3D4 306 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 PRRT2Q7Z6L0 340 aaPredicted RBP10.92□□□□□ -0.66
TTC1-201ENST00000231238 CLEC4DQ8WXI8 215 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 PAGE5Q96GU1 130 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 FAM20AQ96MK3 541 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 MAGEF1Q9HAY2 307 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 CBX8Q9HC52 389 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 RMND1Q9NWS8 449 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 PCDHA5Q9Y5H7 936 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 HRH3Q9Y5N1 445 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 KDM3AQ9Y4C1 1321 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 A0A087WWV3 80 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 A0A087X0B3 334 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 UNCXA6NJT0 531 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 SMTNL1A8MU46 457 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 FOXN1O15353 648 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 MYCLP12524 364 aaPredicted RBP10.91□□□□□ -0.66
TTC1-201ENST00000231238 PLCG1P19174 1290 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 EIF2AK2P19525 551 aaKnown RBP10.91□□□□□ -0.66
TTC1-201ENST00000231238 CIITAP33076 1130 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 RPS6P62753 249 aaKnown RBP10.91□□□□□ -0.66
TTC1-201ENST00000231238 TMEM132BQ14DG7 1078 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 CEP55Q53EZ4 464 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 LUZP1Q86V48 1076 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 ANKRD35Q8N283 1001 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 IGSF22Q8N9C0 903 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 SYTL5Q8TDW5 730 aaPredicted RBP10.91□□□□□ -0.66
TTC1-201ENST00000231238 STAMQ92783 540 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 TRIM44Q96DX7 344 aaPredicted RBP10.91□□□□□ -0.66
TTC1-201ENST00000231238 WNK4Q96J92 1243 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 RMDN3Q96TC7 470 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 GRIP2Q9C0E4 1043 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 NT5C3AQ9H0P0 336 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 FBXO40Q9UH90 709 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 KCNH4Q9UQ05 1017 aa10.91□□□□□ -0.66
TTC1-201ENST00000231238 PHIPQ8WWQ0 1821 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 FAM86B1E9PN63 330 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 GAS7O60861 476 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 SSBP05455 408 aaKnown RBP eCLIP10.9□□□□□ -0.66
TTC1-201ENST00000231238 PTMAP06454 111 aaKnown RBP10.9□□□□□ -0.66
TTC1-201ENST00000231238 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 CCDC173Q0VFZ6 552 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 BAATQ14032 418 aaPredicted RBP10.9□□□□□ -0.66
TTC1-201ENST00000231238 DPCR1Q3MIW9 517 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 LDLRAD1Q5T700 205 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 WDR78Q5VTH9 848 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 LRCH2Q5VUJ6 765 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 SLC30A10Q6XR72 485 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 C11orf57Q6ZUT1 292 aaPredicted RBP10.9□□□□□ -0.66
TTC1-201ENST00000231238 SV2BQ7L1I2 683 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 NCAPG2Q86XI2 1143 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 AOPEPQ8N6M6 819 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 TRIML1Q8N9V2 468 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 CHST13Q8NET6 341 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 HAS1Q92839 578 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 GJA10Q969M2 543 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 MBOAT7Q96N66 472 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 P2RX7Q99572 595 aaKnown RBP10.9□□□□□ -0.66
TTC1-201ENST00000231238 ZNF577Q9BSK1 485 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 LRRC27Q9C0I9 530 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 ASCC2Q9H1I8 757 aaPredicted RBP10.9□□□□□ -0.66
TTC1-201ENST00000231238 BLZF1Q9H2G9 400 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 KCNMB3Q9NPA1 279 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 NMRK2Q9NPI5 230 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 STK17AQ9UEE5 414 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 TUBE1Q9UJT0 475 aa10.9□□□□□ -0.66
TTC1-201ENST00000231238 ATP2A1O14983 1001 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 MSH4O15457 936 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 CHMP2AO43633 222 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 CETPP11597 493 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 RHOQP17081 205 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 CCND2P30279 289 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 HOXA7P31268 230 aaPredicted RBP10.89□□□□□ -0.67
TTC1-201ENST00000231238 GTF2A2P52657 109 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 HERVK_113P62684 666 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 FMR1Q06787 632 aaKnown RBP eCLIP10.89□□□□□ -0.67
TTC1-201ENST00000231238 SMCR8Q8TEV9 937 aaPredicted RBP10.89□□□□□ -0.67
TTC1-201ENST00000231238 GSDMAQ96QA5 445 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 TAAR1Q96RJ0 339 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 TEKT3Q9BXF9 490 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 ETNK1Q9HBU6 452 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 MAN1B1Q9UKM7 699 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 ZNF214Q9UL59 606 aaPredicted RBP10.89□□□□□ -0.67
TTC1-201ENST00000231238 ADAMTS5Q9UNA0 930 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 RIPK3Q9Y572 518 aa10.89□□□□□ -0.67
TTC1-201ENST00000231238 EDIL3O43854 480 aa10.88□□□□□ -0.67
TTC1-201ENST00000231238 KRT18P05783 430 aaKnown RBP10.88□□□□□ -0.67
TTC1-201ENST00000231238 MYL1P05976 194 aa10.88□□□□□ -0.67
TTC1-201ENST00000231238 COPB2P35606 906 aa10.88□□□□□ -0.67
TTC1-201ENST00000231238 ASIC1P78348 528 aa10.88□□□□□ -0.67
TTC1-201ENST00000231238 STIM1Q13586 685 aa10.88□□□□□ -0.67
TTC1-201ENST00000231238 TPD52L1Q16890 204 aaPredicted RBP10.88□□□□□ -0.67
TTC1-201ENST00000231238 PCNX4Q63HM2 1172 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms