RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 APPBP2Q92624 585 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 GDAP1L1Q96MZ0 367 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 AIFM3Q96NN9 605 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 TUBGCP5Q96RT8 1024 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 ZKSCAN3Q9BRR0 538 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 SELENOOQ9BVL4 669 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 HSFX1Q9UBD0 423 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 PXDNLA1KZ92 1463 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 USP42Q9H9J4 1324 aaKnown RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 A0A0J9YVX5 310 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 HOXA2O43364 376 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 NR1I2O75469 434 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 ASLP04424 464 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 PDCP20941 246 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 ATICP31939 592 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 PHKA1P46020 1223 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 MSLNQ13421 630 aaPredicted RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 PPP1R7Q15435 360 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 SPRED3Q2MJR0 410 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 PDCD4Q53EL6 469 aaKnown RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 COBLL1Q53SF7 1204 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 FOXB2Q5VYV0 432 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 ATL3Q6DD88 541 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 PADI6Q6TGC4 694 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 LSMEM2Q8N112 164 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 CMTR1Q8N1G2 835 aaKnown RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 FAM174AQ8TBP5 190 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 TMC2Q8TDI7 906 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 ATP8B4Q8TF62 1192 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 SRPK1Q96SB4 655 aaKnown RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 CENPOQ9BU64 300 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 NAA15Q9BXJ9 866 aaKnown RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 PANK4Q9NVE7 773 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.19□□□□□ -1.42
RFX4-201ENST00000229387 FAM184BQ9ULE4 1060 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 TTC7AQ9ULT0 858 aaPredicted RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 EP400Q96L91 3159 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 DYTNA2CJ06 578 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L15C9J2P7 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L10C9JJH3 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L13C9JLJ4 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L12C9JPN9 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L11C9JVI0 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L21D6R901 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L18D6R9N7 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L22D6RA61 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L17D6RBQ6 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L19D6RCP7 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L20D6RJB6 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 E7EWF7 191 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 STARD3NLO95772 234 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 GNAZP19086 355 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 IL4RP24394 825 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 IL15P40933 162 aaPredicted RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 USP17L24Q0WX57 530 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 TTMPQ5BVD1 217 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 SLC9C2Q5TAH2 1124 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 RNF220Q5VTB9 566 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 AGAP9Q5VTM2 703 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 GRAMD4Q6IC98 578 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 CD302Q8IX05 232 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 RNF10Q8N5U6 811 aaKnown RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 LENG1Q96BZ8 264 aaPredicted RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 ITPKCQ96DU7 683 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 ZNF304Q9HCX3 659 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 SH2B1Q9NRF2 756 aaPredicted RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 IFNKQ9P0W0 207 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 PDP2Q9P2J9 529 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 FAM32AQ9Y421 112 aaKnown RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 NCAPD2Q15021 1401 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 KANSL1LA0AUZ9 987 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 CTAGE9A4FU28 777 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 POTEFA5A3E0 1075 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 HIP1O00291 1037 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 FGAP02671 866 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 NFKBIAP25963 317 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 MCAMP43121 646 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 SPCS2Q15005 226 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 DUS1LQ6P1R4 473 aaKnown RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 RUFY4Q6ZNE9 571 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 SCUBE1Q8IWY4 988 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 JDP2Q8WYK2 163 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 HPS3Q969F9 1004 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 GFM2Q969S9 779 aaKnown RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 FAM136AQ96C01 138 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 HIC2Q96JB3 615 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 PARVGQ9HBI0 331 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 PCDH12Q9NPG4 1184 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 ATAD3AQ9NVI7 634 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 SCHIP1Q9P0W5 487 aaPredicted RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 ZNF180Q9UJW8 692 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 LRRC37A3O60309 1634 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 PTPDC1A2A3K4 754 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 GMNCA6NCL1 334 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 CCDC85CA6NKD9 419 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 ERVV-2B6SEH9 535 aa6.18□□□□□ -1.42
RFX4-201ENST00000229387 HNRNPRO43390 633 aaKnown RBP6.18□□□□□ -1.42
RFX4-201ENST00000229387 STRNO43815 780 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms