RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CHRNDQ07001 517 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 USPL1Q5W0Q7 1092 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 TRIM10Q9UDY6 481 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 GGT7Q9UJ14 662 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 FRMPD2Q68DX3 1309 aaPredicted RBP14.86□□□□□ -0.03
HCFC2-201ENST00000229330 CHN1P15882 459 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 PDE1BQ01064 536 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 TMEM154Q6P9G4 183 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 TBCKQ8TEA7 893 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 HSPA9P38646 679 aaKnown RBP14.86□□□□□ -0.03
HCFC2-201ENST00000229330 BPIFB4P59827 614 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 AOC3Q16853 763 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 TRPM8Q7Z2W7 1104 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 MB21D2Q8IYB1 491 aaPredicted RBP14.86□□□□□ -0.03
HCFC2-201ENST00000229330 STAG2Q8N3U4 1231 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 CCDC127Q96BQ5 260 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 ADGRB3O60242 1522 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 CDHR2Q9BYE9 1310 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 ARHGAP10A1A4S6 786 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 MRPS35P82673 323 aaKnown RBP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 PABPC4Q13310 644 aaKnown RBP eCLIP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 CCDC92Q53HC0 331 aaPredicted RBP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 MMGT1Q8N4V1 131 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 HIPK4Q8NE63 616 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 MRPL46Q9H2W6 279 aaKnown RBP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 SH2D4AQ9H788 454 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 USP15Q9Y4E8 981 aaPredicted RBP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 LRRIQ3A6PVS8 624 aaPredicted RBP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 SCP2P22307 547 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 CENPUQ71F23 418 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 KRT26Q7Z3Y9 468 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 NSMCE1Q8WV22 266 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 SCYL1Q96KG9 808 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 NT5C1BQ96P26 610 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 USP40Q9NVE5 1235 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 TCP11X1B4DZS4 312 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 CLIC2O15247 247 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 AGTP01019 485 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 HEG1Q9ULI3 1381 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 IQANK1A0A1B0GTG1 560 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 IPO5O00410 1097 aaKnown RBP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 TOM1L1O75674 476 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 CFBP00751 764 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 GAP43P17677 238 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 FAM83BQ5T0W9 1011 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 PI16Q6UXB8 463 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 KDM7AQ6ZMT4 941 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 RBM43Q6ZSC3 357 aaKnown RBP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 BRINP3Q76B58 766 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.85□□□□□ -0.03
HCFC2-201ENST00000229330 CCDC68Q9H2F9 335 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 VCPKMTQ9H867 229 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 ATG3Q9NT62 314 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 CDC42BPGQ6DT37 1551 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 CAV1Q03135 178 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 RNF207Q6ZRF8 634 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 UNC13DQ70J99 1090 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 SDCCAG3Q96C92 435 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 E9PCH4 1651 aa14.85□□□□□ -0.03
HCFC2-201ENST00000229330 PRKAB2O43741 272 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 ALDH1B1P30837 517 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 MDM2Q00987 491 aaPredicted RBP14.84□□□□□ -0.03
HCFC2-201ENST00000229330 AGGF1Q8N302 714 aaeCLIP14.84□□□□□ -0.03
HCFC2-201ENST00000229330 LARGE2Q8N3Y3 721 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 ENGASEQ8NFI3 743 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 OXER1Q8TDS5 423 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 FAM161BQ96MY7 647 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 SAYSD1Q9NPB0 183 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 H7C0C1 242 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 TMOD1P28289 359 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 ATP5OP48047 213 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 YWHAEP62258 255 aaKnown RBP14.84□□□□□ -0.03
HCFC2-201ENST00000229330 MFSD14BQ5SR56 506 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 TTC1Q99614 292 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 TRIM56Q9BRZ2 755 aaKnown RBP14.84□□□□□ -0.03
HCFC2-201ENST00000229330 LAMC1P11047 1609 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 GPC4O75487 556 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 CHRNA3P32297 505 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 CYP4A11Q02928 519 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 RSRC2Q7L4I2 434 aaKnown RBP14.84□□□□□ -0.03
HCFC2-201ENST00000229330 PROM2Q8N271 834 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 MS4A14Q96JA4 679 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 AMACRQ9UHK6 382 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 GJA3Q9Y6H8 435 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 ABCA6Q8N139 1617 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 NCF2P19878 526 aaPredicted RBP14.84□□□□□ -0.03
HCFC2-201ENST00000229330 GTF2IP78347 998 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 ODR4Q5SWX8 454 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 CRLF3Q8IUI8 442 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 KIF9Q9HAQ2 790 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 ZNF711Q9Y462 761 aa14.84□□□□□ -0.03
HCFC2-201ENST00000229330 PPP2R5CQ13362 524 aa14.83□□□□□ -0.03
HCFC2-201ENST00000229330 PYROXD1Q8WU10 500 aa14.83□□□□□ -0.03
HCFC2-201ENST00000229330 UBE2TQ9NPD8 197 aaPredicted RBP14.83□□□□□ -0.03
HCFC2-201ENST00000229330 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.83□□□□□ -0.03
HCFC2-201ENST00000229330 DCTN4Q9UJW0 460 aa14.83□□□□□ -0.03
HCFC2-201ENST00000229330 SPATA31A3Q5VYP0 1347 aa14.83□□□□□ -0.03
HCFC2-201ENST00000229330 EEF1DP29692 281 aaKnown RBP14.83□□□□□ -0.04
HCFC2-201ENST00000229330 TCP10Q12799 353 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms