RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 SUGCTQ9HAC7 445 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 TFR2Q9UP52 801 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 SNCAIPQ9Y6H5 919 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 ZHX2Q9Y6X8 837 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 PPP1R11O60927 126 aaPredicted RBP27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 CLSTN1O94985 981 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 SERPING1P05155 500 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 LMAN1P49257 510 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 AP3B2Q13367 1082 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 VGLL4Q14135 290 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 CDC37Q16543 378 aaPredicted RBP27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 EDRF1Q3B7T1 1238 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 GLE1Q53GS7 698 aaKnown RBP27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 LEKR1Q6ZMV7 388 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 KCNK18Q7Z418 384 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 TEX2Q8IWB9 1127 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 KCTD17Q8N5Z5 321 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 GOLGA6L1Q8N7Z2 621 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 HPCAL4Q9UM19 191 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 FAN1Q9Y2M0 1017 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 DUSP10Q9Y6W6 482 aa27.41■■□□□ 1.98
RUNDC3A-201ENST00000225441 OTOFQ9HC10 1997 aa27.4■■□□□ 1.98
RUNDC3A-201ENST00000225441 PLA2G6O60733 806 aa27.4■■□□□ 1.98
RUNDC3A-201ENST00000225441 QRICH1Q2TAL8 776 aa27.4■■□□□ 1.98
RUNDC3A-201ENST00000225441 NOX5Q96PH1 765 aa27.4■■□□□ 1.98
RUNDC3A-201ENST00000225441 TSPYL1Q9H0U9 437 aa27.4■■□□□ 1.98
RUNDC3A-201ENST00000225441 PRR12Q9ULL5 1215 aa27.4■■□□□ 1.98
RUNDC3A-201ENST00000225441 PHIPQ8WWQ0 1821 aa27.4■■□□□ 1.98
RUNDC3A-201ENST00000225441 PDE2AO00408 941 aaPredicted RBP27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 TBX3O15119 743 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 EPHB6O15197 1021 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 WDR46O15213 610 aaKnown RBP27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 PLEKP08567 350 aaPredicted RBP27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 TNFRSF8P28908 595 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 BACE1P56817 501 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 CCDC40Q4G0X9 1142 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 MAP1SQ66K74 1059 aaPredicted RBP27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 CHURC1Q8WUH1 139 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 KCNMB3Q9NPA1 279 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 PCDHA2Q9Y5H9 948 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 CSADQ9Y600 493 aa27.39■■□□□ 1.98
RUNDC3A-201ENST00000225441 FRMD3A2A2Y4 597 aa27.39■■□□□ 1.97
RUNDC3A-201ENST00000225441 TRAF5O00463 557 aa27.39■■□□□ 1.97
RUNDC3A-201ENST00000225441 PAFAH1B1P43034 410 aa27.39■■□□□ 1.97
RUNDC3A-201ENST00000225441 KCNMA1Q12791 1236 aa27.39■■□□□ 1.97
RUNDC3A-201ENST00000225441 SFMBT2Q5VUG0 894 aa27.39■■□□□ 1.97
RUNDC3A-201ENST00000225441 FAM160B2Q86V87 743 aa27.39■■□□□ 1.97
RUNDC3A-201ENST00000225441 OSBPL9Q96SU4 736 aa27.39■■□□□ 1.97
RUNDC3A-201ENST00000225441 FEM1BQ9UK73 627 aa27.39■■□□□ 1.97
RUNDC3A-201ENST00000225441 UBE2SQ16763 222 aa27.38■■□□□ 1.97
RUNDC3A-201ENST00000225441 HGSNATQ68CP4 663 aa27.38■■□□□ 1.97
RUNDC3A-201ENST00000225441 HAUS3Q68CZ6 603 aa27.38■■□□□ 1.97
RUNDC3A-201ENST00000225441 TRIM59Q8IWR1 403 aa27.38■■□□□ 1.97
RUNDC3A-201ENST00000225441 CRACR2AQ9BSW2 395 aa27.38■■□□□ 1.97
RUNDC3A-201ENST00000225441 EMILIN3Q9NT22 766 aa27.38■■□□□ 1.97
RUNDC3A-201ENST00000225441 PLA2G4BP0C869 781 aa27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 DGKZQ13574 1117 aa27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 CAPN6Q9Y6Q1 641 aa27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 TULP2O00295 520 aa27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 TTLL12Q14166 644 aaPredicted RBP27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 ECM1Q16610 540 aa27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 C10orf76Q5T2E6 689 aa27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 SPATA4Q8NEY3 305 aa27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 AENQ8WTP8 325 aaKnown RBP27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 TANGO6Q9C0B7 1094 aa27.37■■□□□ 1.97
RUNDC3A-201ENST00000225441 MYH7BA7E2Y1 1941 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 NKRFO15226 690 aaKnown RBP eCLIP27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 N4BP1O75113 896 aaKnown RBP27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 MOCS3O95396 460 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 VCAM1P19320 739 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 TNNT3P45378 269 aaPredicted RBP27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 MOB2Q70IA6 237 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 LDHDQ86WU2 507 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 ANKRD13AQ8IZ07 590 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 ERMNQ8TAM6 284 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 NMRK2Q9NPI5 230 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 AFG3L2Q9Y4W6 797 aa27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.36■■□□□ 1.97
RUNDC3A-201ENST00000225441 A0A0U1RQG5 324 aaPredicted RBP27.35■■□□□ 1.97
RUNDC3A-201ENST00000225441 C19orf81C9J6K1 198 aa27.35■■□□□ 1.97
RUNDC3A-201ENST00000225441 ZNF185O15231 689 aa27.35■■□□□ 1.97
RUNDC3A-201ENST00000225441 SNAP25P60880 206 aa27.35■■□□□ 1.97
RUNDC3A-201ENST00000225441 C12orf42Q96LP6 360 aa27.35■■□□□ 1.97
RUNDC3A-201ENST00000225441 AIPL1Q9NZN9 384 aa27.35■■□□□ 1.97
RUNDC3A-201ENST00000225441 ATP8B3O60423 1300 aa27.35■■□□□ 1.97
RUNDC3A-201ENST00000225441 SYF2O95926 243 aaKnown RBP27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 CAPN2P17655 700 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 ANXA13P27216 316 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 LRRC41Q15345 812 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 CCDC181Q5TID7 509 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 ARMC9Q7Z3E5 817 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 SELENOOQ9BVL4 669 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 KCTD10Q9H3F6 313 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 MLXIPQ9HAP2 919 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 FBXO28Q9NVF7 368 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 BTNL10A8MVZ5 291 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 PRPF6O94906 941 aaKnown RBP27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 FOSP01100 380 aaPredicted RBP27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 GYS2P54840 703 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 AMNQ9BXJ7 453 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms