RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 PCDHB13Q9Y5F0 798 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 NFS1Q9Y697 457 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 SHBGP04278 402 aa13.77□□□□□ -0.2
PITRM1-201ENST00000224949 UCHL3P15374 230 aa13.77□□□□□ -0.2
PITRM1-201ENST00000224949 STAT3P40763 770 aa13.77□□□□□ -0.2
PITRM1-201ENST00000224949 PROM2Q8N271 834 aa13.77□□□□□ -0.2
PITRM1-201ENST00000224949 ANKS4BQ8N8V4 417 aa13.77□□□□□ -0.2
PITRM1-201ENST00000224949 DYDC1Q8WWB3 177 aa13.77□□□□□ -0.2
PITRM1-201ENST00000224949 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.2
PITRM1-201ENST00000224949 ARMCX3Q9UH62 379 aaPredicted RBP13.77□□□□□ -0.2
PITRM1-201ENST00000224949 NR2E1Q9Y466 385 aa13.77□□□□□ -0.2
PITRM1-201ENST00000224949 COL4A1P02462 1669 aa13.77□□□□□ -0.2
PITRM1-201ENST00000224949 SLC16A2P36021 539 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 CDK8P49336 464 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 PLCB4Q15147 1175 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 RPAINQ86UA6 219 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 FAM228AQ86W67 206 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 TRIM59Q8IWR1 403 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 CACNA1SQ13698 1873 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 MYCNP04198 464 aaPredicted RBP13.77□□□□□ -0.21
PITRM1-201ENST00000224949 PLA2G4BP0C869 781 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 MYO1EQ12965 1108 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 PICALMQ13492 652 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 PPP2R5AQ15172 486 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 TPCN2Q8NHX9 752 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 SCFD2Q8WU76 684 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 TATDN2Q93075 761 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 MTMR9Q96QG7 549 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 XPO6Q96QU8 1125 aaKnown RBP13.77□□□□□ -0.21
PITRM1-201ENST00000224949 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 SPZ1Q9BXG8 430 aa13.77□□□□□ -0.21
PITRM1-201ENST00000224949 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 F8VZ95 297 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 PAX7P23759 505 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 CDC25CP30307 473 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 PSMD2Q13200 908 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 DRP2Q13474 957 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 NBPF9Q3BBW0 867 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 DNAJC19Q96DA6 116 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 TACO1Q9BSH4 297 aaKnown RBP13.76□□□□□ -0.21
PITRM1-201ENST00000224949 AZI2Q9H6S1 392 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 MLXIPLQ9NP71 852 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 SAMD15Q9P1V8 674 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 AMFRQ9UKV5 643 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 ABCB11O95342 1321 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 EIF4E1BA6NMX2 242 aaKnown RBP13.76□□□□□ -0.21
PITRM1-201ENST00000224949 TRIM37O94972 964 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 XRCC5P13010 732 aaKnown RBP13.76□□□□□ -0.21
PITRM1-201ENST00000224949 ACCSLQ4AC99 568 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 SCFD1Q8WVM8 642 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 PAGR1Q9BTK6 254 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 L3MBTL1Q9Y468 752 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 RGS16O15492 202 aaPredicted RBP13.76□□□□□ -0.21
PITRM1-201ENST00000224949 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 CASP5P51878 434 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 PABPC4Q13310 644 aaKnown RBP eCLIP13.76□□□□□ -0.215e-18■■■■■ 33.3
PITRM1-201ENST00000224949 LRRC14Q15048 493 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 POTEEQ6S8J3 1075 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 SYN2Q92777 582 aaPredicted RBP13.76□□□□□ -0.21
PITRM1-201ENST00000224949 NLRP3Q96P20 1036 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 GANQ9H2C0 597 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 BCS1LQ9Y276 419 aa13.76□□□□□ -0.21
PITRM1-201ENST00000224949 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■■■□ 20.6
PITRM1-201ENST00000224949 DENND2CQ68D51 928 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 OTUD6AQ7L8S5 288 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 GLYCTKQ8IVS8 523 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 ACTRT1Q8TDG2 376 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 LMBR1Q8WVP7 490 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 PRMT1Q99873 361 aaKnown RBP13.75□□□□□ -0.21
PITRM1-201ENST00000224949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■■■■ 93.4
PITRM1-201ENST00000224949 INTS9Q9NV88 658 aaKnown RBP13.75□□□□□ -0.21
PITRM1-201ENST00000224949 AIPL1Q9NZN9 384 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 TMOD4Q9NZQ9 345 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 STK38LQ9Y2H1 464 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 GNA14O95837 355 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 BYSLQ13895 437 aaKnown RBP13.75□□□□□ -0.21
PITRM1-201ENST00000224949 ZCWPW2Q504Y3 356 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 COBLL1Q53SF7 1204 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
PITRM1-201ENST00000224949 CCDC50Q8IVM0 306 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 LRRC34Q8IZ02 419 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 STAMBPL1Q96FJ0 436 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 NOD2Q9HC29 1040 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 A1CFQ9NQ94 594 aaKnown RBP13.75□□□□□ -0.21
PITRM1-201ENST00000224949 GCNT4Q9P109 453 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 TMEM59LQ9UK28 342 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
PITRM1-201ENST00000224949 CCDC188H7C350 402 aa13.74□□□□□ -0.21
PITRM1-201ENST00000224949 AFPP02771 609 aaKnown RBP13.74□□□□□ -0.21
PITRM1-201ENST00000224949 DRD4P21917 467 aa13.74□□□□□ -0.21
PITRM1-201ENST00000224949 BTDP43251 543 aa13.74□□□□□ -0.21
PITRM1-201ENST00000224949 IFI35P80217 286 aaPredicted RBP13.74□□□□□ -0.21
PITRM1-201ENST00000224949 DR1Q01658 176 aa13.74□□□□□ -0.21
PITRM1-201ENST00000224949 AGBL2Q5U5Z8 902 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms