RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 PJA2O43164 708 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 ONECUT3O60422 494 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-201ENST00000221232 GNA14O95837 355 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 RPA1P27694 616 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 PDE6BP35913 854 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 CARSP49589 748 aaKnown RBP16.05■□□□□ 0.16
CNOT3-201ENST00000221232 COG2Q14746 738 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 MYCT1Q8N699 235 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 SYT2Q8N9I0 419 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-201ENST00000221232 GOLGA5Q8TBA6 731 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 EHD4Q9H223 541 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 GANQ9H2C0 597 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.05■□□□□ 0.165e-7■■■■■ 70.1
CNOT3-201ENST00000221232 NFU1Q9UMS0 254 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 CYP3A7-CYP3A51PA0A087WV96 503 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 DDX39AO00148 427 aaKnown RBP16.05■□□□□ 0.16
CNOT3-201ENST00000221232 TBCAO75347 108 aaKnown RBP16.05■□□□□ 0.16
CNOT3-201ENST00000221232 XRCC5P13010 732 aaKnown RBP16.05■□□□□ 0.16
CNOT3-201ENST00000221232 UCHL3P15374 230 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 CYP3A7P24462 503 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 NAB2Q15742 525 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 PRR12Q9ULL5 1215 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 TRIM66O15016 1216 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 APBA3O96018 575 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 FAM153BP0C7A2 387 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 PON1P27169 355 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 FAM153CQ494X1 144 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 RBM46Q8TBY0 533 aaKnown RBP16.04■□□□□ 0.16
CNOT3-201ENST00000221232 AENQ8WTP8 325 aaKnown RBP16.04■□□□□ 0.16
CNOT3-201ENST00000221232 DYDC2Q96IM9 177 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 PSD3Q9NYI0 1048 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 STIM2Q9P246 746 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 FAM153AQ9UHL3 310 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 RABGAP1Q9Y3P9 1069 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 KCNK3O14649 394 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
CNOT3-201ENST00000221232 NR3C1P04150 777 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-201ENST00000221232 KCTD16Q68DU8 428 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 LRRC31Q6UY01 552 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 MIGA2Q7L4E1 593 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 NAP1L4Q99733 375 aaKnown RBP16.04■□□□□ 0.16
CNOT3-201ENST00000221232 VIPAS39Q9H9C1 493 aa16.04■□□□□ 0.16
CNOT3-201ENST00000221232 GRID2IPA4D2P6 1211 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 C10orf67Q8IYJ2 551 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 SH2D3AQ9BRG2 576 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 EDEM3Q9BZQ6 932 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 MYO3BQ8WXR4 1341 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
CNOT3-201ENST00000221232 PRLRP16471 622 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 AP3B2Q13367 1082 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 TBC1D10BQ4KMP7 808 aaPredicted RBP16.03■□□□□ 0.16
CNOT3-201ENST00000221232 STRIP1Q5VSL9 837 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 TATDN1Q6P1N9 297 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 IRF2BP2Q7Z5L9 587 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 AP1M1Q9BXS5 423 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 GLT8D2Q9H1C3 349 aa16.03■□□□□ 0.16
CNOT3-201ENST00000221232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.16
CNOT3-201ENST00000221232 GOLGA6CA6NDK9 693 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 GFPT2O94808 682 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 GOLGA6DP0CG33 693 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 AARSP49588 968 aaKnown RBP eCLIP16.02■□□□□ 0.16
CNOT3-201ENST00000221232 CYP2J2P51589 502 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 CDAN1Q8IWY9 1227 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 RNF10Q8N5U6 811 aaKnown RBP16.02■□□□□ 0.16
CNOT3-201ENST00000221232 IPO4Q8TEX9 1081 aaKnown RBP16.02■□□□□ 0.16
CNOT3-201ENST00000221232 CRYGNQ8WXF5 182 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 ARL8AQ96BM9 186 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 GOLGA6AQ9NYA3 693 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 LY75O60449 1722 aa16.02■□□□□ 0.16
CNOT3-201ENST00000221232 FAM13AO94988 1023 aa16.02■□□□□ 0.15
CNOT3-201ENST00000221232 SREBF1P36956 1147 aa16.02■□□□□ 0.15
CNOT3-201ENST00000221232 WDR18Q9BV38 432 aa16.02■□□□□ 0.15
CNOT3-201ENST00000221232 NUCKS1Q9H1E3 243 aaKnown RBP16.02■□□□□ 0.15
CNOT3-201ENST00000221232 LUC7LQ9NQ29 371 aaKnown RBP16.02■□□□□ 0.15
CNOT3-201ENST00000221232 AIPL1Q9NZN9 384 aa16.02■□□□□ 0.15
CNOT3-201ENST00000221232 FRMD3A2A2Y4 597 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 CALUO43852 315 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-201ENST00000221232 CEP104O60308 925 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 EDRF1Q3B7T1 1238 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 Q4G0T1 1027 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 RINT1Q6NUQ1 792 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 ALKBH5Q6P6C2 394 aaKnown RBP16.01■□□□□ 0.15
CNOT3-201ENST00000221232 MBOAT7Q96N66 472 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 IDI2Q9BXS1 227 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 GCNT4Q9P109 453 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 VAV3Q9UKW4 847 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 ASTN1O14525 1302 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 PITPNM2Q9BZ72 1349 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 RBAK-RBAKDNI3L0D1 243 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 KRT14P02533 472 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 LRCH2Q5VUJ6 765 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
CNOT3-201ENST00000221232 MSL3Q8N5Y2 521 aaKnown RBP16.01■□□□□ 0.15
CNOT3-201ENST00000221232 U2AF1L4Q8WU68 220 aaKnown RBP16.01■□□□□ 0.15
CNOT3-201ENST00000221232 SEPT11Q9NVA2 429 aaKnown RBP16.01■□□□□ 0.15
CNOT3-201ENST00000221232 FBXO28Q9NVF7 368 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms