RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PCDHA4Q9UN74 947 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 ZNF185O15231 689 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 NAT1P18440 290 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 PAK2Q13177 524 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 IFI16Q16666 785 aaKnown RBP14.85□□□□□ -0.03
GABPB1-201ENST00000220429 RNF168Q8IYW5 571 aaPredicted RBP14.85□□□□□ -0.03
GABPB1-201ENST00000220429 PROM2Q8N271 834 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 RASGRP4Q8TDF6 673 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 KIFAP3Q92845 792 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 NDNQ99608 321 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 ARHGEF10LQ9HCE6 1279 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 NUB1Q9Y5A7 615 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 GAKO14976 1311 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 PALM3A6NDB9 673 aaPredicted RBP14.84□□□□□ -0.03
GABPB1-201ENST00000220429 C6orf229H3BNL8 230 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 M0R2N6 131 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 LGR5O75473 907 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 STAT6P42226 847 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 SEPT2Q15019 361 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 MAEAQ7L5Y9 396 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 CPLX4Q7Z7G2 160 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 FGD4Q96M96 766 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 EYA3Q99504 573 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 BZW2Q9Y6E2 419 aaKnown RBP14.84□□□□□ -0.03
GABPB1-201ENST00000220429 SLC7A5Q01650 507 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 DPYDQ12882 1025 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 TMEM132AQ24JP5 1023 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 FKBP15Q5T1M5 1219 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 RNF220Q5VTB9 566 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 CYP26C1Q6V0L0 522 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 SLC35B4Q969S0 331 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 DMAP1Q9NPF5 467 aaPredicted RBP14.84□□□□□ -0.03
GABPB1-201ENST00000220429 SAMSN1Q9NSI8 373 aaKnown RBP14.84□□□□□ -0.03
GABPB1-201ENST00000220429 TMOD4Q9NZQ9 345 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 TMCO1Q9UM00 188 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 GMEB1Q9Y692 573 aa14.84□□□□□ -0.03
GABPB1-201ENST00000220429 BACH1O14867 736 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 GOLGA8HP0CJ92 632 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 PLCG2P16885 1265 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 KRT27Q7Z3Y8 459 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 APBB1IPQ7Z5R6 666 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-201ENST00000220429 C4orf32Q8N8J7 132 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 HAUS4Q9H6D7 363 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 MYH8P13535 1937 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 FXR1P51114 621 aaKnown RBP eCLIP14.83□□□□□ -0.04
GABPB1-201ENST00000220429 CUL4BQ13620 913 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 PRCCQ92733 491 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-201ENST00000220429 TRAPPC9Q96Q05 1148 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 ARPC5LQ9BPX5 153 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 TAF1DQ9H5J8 278 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-201ENST00000220429 ZNF287Q9HBT7 754 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.83□□□□□ -0.04
GABPB1-201ENST00000220429 SLC12A6Q9UHW9 1150 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 WDR37Q9Y2I8 494 aa14.83□□□□□ -0.04
GABPB1-201ENST00000220429 TMEM221A6NGB7 291 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 PPEF1O14829 653 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-201ENST00000220429 PDHA1P08559 390 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 VIL1P09327 827 aaKnown RBP14.82□□□□□ -0.04
GABPB1-201ENST00000220429 NQO1P15559 274 aaKnown RBP14.82□□□□□ -0.04
GABPB1-201ENST00000220429 SP100P23497 879 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-201ENST00000220429 TXNRD1Q16881 649 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 TMEM154Q6P9G4 183 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 GBP7Q8N8V2 638 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-201ENST00000220429 STAMQ92783 540 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 CPVLQ9H3G5 476 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 STIM2Q9P246 746 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 PCDHA6Q9UN73 950 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 PCDHA8Q9Y5H6 950 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 GYPCP04921 128 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
GABPB1-201ENST00000220429 ERCC5P28715 1186 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-201ENST00000220429 TNFRSF8P28908 595 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 PCK1P35558 622 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 PBX1P40424 430 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 ALDH5A1P51649 535 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-201ENST00000220429 VAV2P52735 878 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 GTF2IP78347 998 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 KIAA0753Q2KHM9 967 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 HEATR3Q7Z4Q2 680 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 SLF2Q8IX21 1173 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 SP8Q8IXZ3 490 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 RPS6KC1Q96S38 1066 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 BARHL2Q9NY43 387 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 DAGLAQ9Y4D2 1042 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 LRRC42Q9Y546 428 aa14.82□□□□□ -0.04
GABPB1-201ENST00000220429 GOLGA6L10A0A0M3HER8 536 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 PHF20L1A8MW92 1017 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 KLRF2D3W0D1 207 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 RIMBP2O15034 1052 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 MRPS25P82663 173 aaKnown RBP14.81□□□□□ -0.04
GABPB1-201ENST00000220429 PPARDQ03181 441 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 PDXDC2PQ6P474 469 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 DAGLBQ8NCG7 672 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 CCDC197Q8NCU1 140 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 PHC3Q8NDX5 983 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 KCNV2Q8TDN2 545 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 RAPGEF5Q92565 580 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 TMEM98Q9Y2Y6 226 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 FLOT1O75955 427 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms