RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 NWD1Q149M9 1564 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 GOLGA8JA6NMD2 632 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 HNRNPRO43390 633 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 SPAG6O75602 509 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CHEK2O96017 543 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 MT-ND3P03897 115 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 SERPINB10P48595 397 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CDR2Q01850 454 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ICA1Q05084 483 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 MAPRE2Q15555 327 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 TRADDQ15628 312 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 PDXDC1Q6P996 788 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 GIPC2Q8TF65 315 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ZMAT2Q96NC0 199 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 YY1AP1Q9H869 796 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHD9-201ENST00000219084 PLAAQ9Y263 795 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 PTPRMP28827 1452 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CREB3O43889 395 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 BBOX1O75936 387 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 GSTA1P08263 222 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 GSTA2P09210 222 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CD19P15391 556 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ZFXP17010 805 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 PLCG1P19174 1290 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 FBLN1P23142 703 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ADD1P35611 737 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 EIF6P56537 245 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 PFKFB3Q16875 520 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 ADCK5Q3MIX3 580 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 DNAJC24Q6P3W2 148 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 C4orf22Q6V702 233 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 TRMT10CQ7L0Y3 403 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 PPM1KQ8N3J5 372 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 PSMB7Q99436 277 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 PCDHB4Q9Y5E5 795 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ERBB3P21860 1342 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 MYO3BQ8WXR4 1341 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 MICAL3Q7RTP6 2002 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 KPNA7A9QM74 516 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 HNRNPDLO14979 420 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 KRT7P08729 469 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 DDIT3P35638 169 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ECE1P42892 770 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 PSMD7P51665 324 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 LAMB3Q13751 1172 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 TBC1D9BQ66K14 1250 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 EPM2AIP1Q7L775 607 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 NIM1KQ8IY84 436 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 SAAL1Q96ER3 474 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 FAM167AQ96KS9 214 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 FAM20AQ96MK3 541 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 FRMD8Q9BZ67 464 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 KIF9Q9HAQ2 790 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 SPC25Q9HBM1 224 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 DNAJC17Q9NVM6 304 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 PNPLA7Q6ZV29 1317 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 F8W031 263 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 TLR3O15455 904 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 IFNB1P01574 187 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 FDX1P10109 184 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 MCF2P10911 925 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 HDAC4P56524 1084 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 C2orf54Q08AI8 447 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 NELFCDQ8IXH7 590 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 TCP11Q8WWU5 503 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 MTBPQ96DY7 904 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 MYL10Q9BUA6 226 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 FRMD8P1Q9BZ68 369 aaPredicted RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 ABCB6Q9NP58 842 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CPS1P31327 1500 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 TADA3O75528 432 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 AGTP01019 485 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 HARSP12081 509 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 MX2P20592 715 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 COPB2P35606 906 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CHRNDQ07001 517 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 ABCB5Q2M3G0 1257 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 RARS2Q5T160 578 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 FAM173BQ6P4H8 233 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 POTEAQ6S8J7 498 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 WDR75Q8IWA0 830 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 PARP9Q8IXQ6 854 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 GUF1Q8N442 669 aaKnown RBP4.74□□□□□ -1.65
CHD9-201ENST00000219084 KCTD6Q8NC69 237 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 MCPH1Q8NEM0 835 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 SLC7A3Q8WY07 619 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 SLC12A6Q9UHW9 1150 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 DIP2BQ9P265 1576 aa4.74□□□□□ -1.65
CHD9-201ENST00000219084 CAPN9O14815 690 aa4.73□□□□□ -1.65
CHD9-201ENST00000219084 CFBP00751 764 aa4.73□□□□□ -1.65
CHD9-201ENST00000219084 CYP2E1P05181 493 aaPredicted RBP4.73□□□□□ -1.65
CHD9-201ENST00000219084 YWHAGP61981 247 aaKnown RBP eCLIP4.73□□□□□ -1.65
CHD9-201ENST00000219084 ART3Q13508 389 aa4.73□□□□□ -1.65
CHD9-201ENST00000219084 USH1GQ495M9 461 aa4.73□□□□□ -1.65
CHD9-201ENST00000219084 TAF1BQ53T94 588 aaPredicted RBP4.73□□□□□ -1.65
CHD9-201ENST00000219084 XKR9Q5GH70 373 aa4.73□□□□□ -1.65
CHD9-201ENST00000219084 PLA2G12BQ9BX93 195 aa4.73□□□□□ -1.65
CHD9-201ENST00000219084 BTG4Q9NY30 223 aa4.73□□□□□ -1.65
CHD9-201ENST00000219084 A0A1B0GTH6 734 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms