RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 ABCB11O95342 1321 aa13.45□□□□□ -0.26
TM9SF4-201ENST00000217315 DDTLA6NHG4 134 aaPredicted RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 IPO5O00410 1097 aaKnown RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 CYP11B2P19099 503 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 BLOC1S4Q9NUP1 217 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 SCAF8Q9UPN6 1271 aaKnown RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 E7EVH7 732 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 HNRNPDLO14979 420 aaKnown RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 KLRC4O43908 158 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 TAL1P17542 331 aaPredicted RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 GBP2P32456 591 aaPredicted RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 VPS41P49754 854 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 MNAT1P51948 309 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 OTUD6AQ7L8S5 288 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 ARHGAP20Q9P2F6 1191 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 SSU72P8A0A1W2PR75 194 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 MED24O75448 989 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 ASNSP08243 561 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 TM4SF1P30408 202 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 SHMT1P34896 483 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 PRELPP51888 382 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 PEX3P56589 373 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 DDR1Q08345 913 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 DMP1Q13316 513 aaPredicted RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 BEND6Q5SZJ8 279 aaPredicted RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 EMBQ6PCB8 327 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 LRRC4BQ9NT99 713 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 TMOD4Q9NZQ9 345 aa13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.44□□□□□ -0.26
TM9SF4-201ENST00000217315 DKC1O60832 514 aaKnown RBP eCLIP13.43□□□□□ -0.263e-7■□□□□ 9
TM9SF4-201ENST00000217315 MXI1P50539 228 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 SLC18A3Q16572 532 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 CCDC121Q6ZUS5 278 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 FAM160B2Q86V87 743 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 TTLL6Q8N841 843 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 C4orf32Q8N8J7 132 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 GLIS3Q8NEA6 775 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 FAM163AQ96GL9 167 aaPredicted RBP13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 GOLPH3Q9H4A6 298 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 KCNK9Q9NPC2 374 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 A0A1W2PQJ5 194 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 RGL2O15211 777 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 UCHL3P15374 230 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 GCLMP48507 274 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 CEP55Q53EZ4 464 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 C10orf76Q5T2E6 689 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 SLC30A10Q6XR72 485 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 TRAPPC11Q7Z392 1133 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 HOOK3Q86VS8 718 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 ACCSQ96QU6 501 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 EYA4O95677 639 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 KLRC1P26715 233 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 RPA1P27694 616 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 POLD1P28340 1107 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 TTC31Q49AM3 519 aaPredicted RBP13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 ZC2HC1CQ53FD0 456 aaPredicted RBP13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 B4GALNT4Q76KP1 1039 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 ZFPM1Q8IX07 1006 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 MAGOHBQ96A72 148 aaKnown RBP13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 LXNQ9BS40 222 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 SPATA31A6Q5VVP1 1343 aa13.43□□□□□ -0.26
TM9SF4-201ENST00000217315 A0A1W2PRG0 241 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 ANKRD62A6NC57 917 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 RSPH10B2B2RC85 870 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 RSPH10BP0C881 870 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 HSPA1LP34931 641 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 MTMR3Q13615 1198 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 DRAP1Q14919 205 aaPredicted RBP13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 KSR1Q8IVT5 923 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 PBKQ96KB5 322 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 CEP170P1Q96L14 293 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 ANKZF1Q9H8Y5 726 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 SPEF2Q9C093 1822 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 ABCC6O95255 1503 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 PDXKO00764 312 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 KIF4AO95239 1232 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 INPP5BP32019 993 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 CYP2C19P33261 490 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 NNTQ13423 1086 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 IRF2BP1Q8IU81 584 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 DDX47Q9H0S4 455 aaKnown RBP13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 A6NNZ2 444 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 SASH3O75995 380 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 FGGP02679 453 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 VIMP08670 466 aaKnown RBP13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 ARHGAP25P42331 645 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 LIG4P49917 911 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 TUBB8Q3ZCM7 444 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 ZNF365Q70YC5 407 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 FRMD5Q7Z6J6 570 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 TMEM206Q9H813 350 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 L1RE1Q9UN81 338 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms