RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 OR6B2Q6IFH4 312 aa12.38□□□□□ -0.43
PKP2-201ENST00000070846 XXYLT1Q8NBI6 393 aa12.38□□□□□ -0.43
PKP2-201ENST00000070846 ZNF653Q96CK0 615 aa12.38□□□□□ -0.43
PKP2-201ENST00000070846 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
PKP2-201ENST00000070846 LBHD1Q9BQE6 289 aaPredicted RBP12.38□□□□□ -0.43
PKP2-201ENST00000070846 SEPT10Q9P0V9 454 aa12.38□□□□□ -0.43
PKP2-201ENST00000070846 BNIP3LO60238 219 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 OPA1O60313 960 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 GFPT2O94808 682 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 XPAP23025 273 aaPredicted RBP12.37□□□□□ -0.43
PKP2-201ENST00000070846 PPFIA1Q13136 1202 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 PHLDB2Q86SQ0 1253 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 IGDCC4Q8TDY8 1250 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 GLT1D1Q96MS3 346 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 ODF2LQ9ULJ1 636 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
PKP2-201ENST00000070846 UPP2O95045 317 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 RARBP10826 455 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 RPS6P62753 249 aaKnown RBP12.37□□□□□ -0.43
PKP2-201ENST00000070846 ELMSAN1Q6PJG2 1045 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 MAP7D3Q8IWC1 876 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 CTAGE3PQ8IX95 158 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 RYBPQ8N488 228 aaPredicted RBP12.37□□□□□ -0.43
PKP2-201ENST00000070846 EIF2AK1Q9BQI3 630 aaKnown RBP12.37□□□□□ -0.43
PKP2-201ENST00000070846 MTIF3Q9H2K0 278 aaKnown RBP12.37□□□□□ -0.43
PKP2-201ENST00000070846 ZC3H13Q5T200 1668 aaKnown RBP12.37□□□□□ -0.43
PKP2-201ENST00000070846 ANXA13P27216 316 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 TUBB4BP68371 445 aa12.37□□□□□ -0.43
PKP2-201ENST00000070846 DDTLA6NHG4 134 aaPredicted RBP12.36□□□□□ -0.43
PKP2-201ENST00000070846 ADGRB1O14514 1584 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 GIPC1O14908 333 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 CUL4BQ13620 913 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 CLUL1Q15846 466 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 NAA35Q5VZE5 725 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 UNC13DQ70J99 1090 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 POLR1AO95602 1720 aaPredicted RBP12.36□□□□□ -0.43
PKP2-201ENST00000070846 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 HUS1O60921 280 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 GCLMP48507 274 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 MXRA7P84157 204 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 GCNAQ96QF7 691 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 POLR3FQ9H1D9 316 aaPredicted RBP12.36□□□□□ -0.43
PKP2-201ENST00000070846 SLC38A10Q9HBR0 1119 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
PKP2-201ENST00000070846 WNT10BO00744 389 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 ITIH3Q06033 890 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 EPHA7Q15375 998 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 CPA4Q9UI42 421 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 ZNF148Q9UQR1 794 aa12.36□□□□□ -0.43
PKP2-201ENST00000070846 RGL2O15211 777 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 TUBBP07437 444 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 TRIM58Q8NG06 486 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 MAIP1Q8WWC4 291 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 C2orf40Q9H1Z8 148 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 H7C0C1 242 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 SH3BP5O60239 455 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 GH1P01241 217 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 ATP5OP48047 213 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 BACE1P56817 501 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 EXOSC10Q01780 885 aaKnown RBP12.35□□□□□ -0.43
PKP2-201ENST00000070846 LRRC63Q05C16 580 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 C11orf57Q6ZUT1 292 aaPredicted RBP12.35□□□□□ -0.43
PKP2-201ENST00000070846 FAM133AQ8N9E0 248 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 NDST4Q9H3R1 872 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 PIN4Q9Y237 131 aaKnown RBP12.35□□□□□ -0.43
PKP2-201ENST00000070846 MAN1A1P33908 653 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 KCNJ6P48051 423 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 SLC12A2P55011 1212 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 PPARDQ03181 441 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 INTS8Q75QN2 995 aaKnown RBP12.35□□□□□ -0.43
PKP2-201ENST00000070846 CCNYQ8ND76 341 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 FCGRTP55899 365 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 EHHADHQ08426 723 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 XKR3Q5GH77 459 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 DNAJC24Q6P3W2 148 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 HAUS1Q96CS2 278 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 JMJD4Q9H9V9 463 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 NGRNQ9NPE2 291 aaKnown RBP12.35□□□□□ -0.43
PKP2-201ENST00000070846 SAR1BQ9Y6B6 198 aa12.35□□□□□ -0.43
PKP2-201ENST00000070846 BZW2Q9Y6E2 419 aaKnown RBP12.35□□□□□ -0.43
PKP2-201ENST00000070846 FAM205CA6NFA0 338 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 ADM5C9JUS6 153 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 TNFAIP2Q03169 654 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 TKFCQ3LXA3 575 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 CFAP157Q5JU67 520 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 URGCPQ8TCY9 931 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 FBF1Q8TES7 1133 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 GTF3C2Q8WUA4 911 aaPredicted RBP12.34□□□□□ -0.43
PKP2-201ENST00000070846 SAAL1Q96ER3 474 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 CALN1Q9BXU9 219 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 SMARCAD1Q9H4L7 1026 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 TSKSQ9UJT2 592 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 TSGA10IPQ3SY00 556 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 HAUS6Q7Z4H7 955 aa12.34□□□□□ -0.43
PKP2-201ENST00000070846 ENOX1Q8TC92 643 aaKnown RBP12.34□□□□□ -0.43
PKP2-201ENST00000070846 TMEM143Q96AN5 459 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms