RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SIK3Q9Y2K2 1263 aa15.82■□□□□ 0.12
RTFDC1-201ENST00000023939 UQCRHLA0A096LP55 91 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 ARHGEF35A5YM69 484 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 SPDYE5A6NIY4 337 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 SOWAHDA6NJG2 315 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 WDR64B1ANS9 1081 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 PES1O00541 588 aaKnown RBP15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 IRF6O14896 467 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 CETN3O15182 167 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 UQCRHP07919 91 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 CCDC175P0C221 793 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 EPHX2P34913 555 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 ETF1P62495 437 aaKnown RBP15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 ZBED6P86452 979 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 ZNF746Q6NUN9 644 aaPredicted RBP15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 TRIM59Q8IWR1 403 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 C4orf19Q8IY42 314 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 BANK1Q8NDB2 785 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 CDHR1Q96JP9 859 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 IWS1Q96ST2 819 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 EDEM3Q9BZQ6 932 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 MRPL44Q9H9J2 332 aaKnown RBP15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 TYW1Q9NV66 732 aaKnown RBP15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 FBXO40Q9UH90 709 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 FAM184BQ9ULE4 1060 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 KCNH4Q9UQ05 1017 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 ADGRG1Q9Y653 693 aa15.81■□□□□ 0.12
RTFDC1-201ENST00000023939 NFASCO94856 1347 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 DDX39AO00148 427 aaKnown RBP15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 ZBTB39O15060 712 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 NKRFO15226 690 aaKnown RBP eCLIP15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 CALUO43852 315 aaPredicted RBP15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 MYBP10242 640 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 ADAM9Q13443 819 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 MEA1Q16626 185 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 TREML2Q5T2D2 321 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 TRIM65Q6PJ69 517 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 DLK2Q6UY11 383 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 STXBP4Q6ZWJ1 553 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 RIOX2Q8IUF8 465 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 DNERQ8NFT8 737 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 PURBQ96QR8 312 aaKnown RBP15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 FIZ1Q96SL8 496 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 TIPINQ9BVW5 301 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 PHLPP2Q6ZVD8 1323 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 RIOK3O14730 519 aaKnown RBP15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 ATP9AO75110 1047 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 MAPTP10636 758 aaKnown RBP15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 PSMC5P62195 406 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 ERVK-24P63145 666 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 CDK17Q00537 523 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 PPP2R3AQ06190 1150 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 CCDC40Q4G0X9 1142 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 FRMD5Q7Z6J6 570 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 PKD2L1Q9P0L9 805 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 TCEAL9Q9UHQ7 104 aa15.8■□□□□ 0.12
RTFDC1-201ENST00000023939 PFASO15067 1338 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 TESPA1A2RU30 521 aaPredicted RBP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 GLTPD2A6NH11 291 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 SLC16A3O15427 465 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 CCNE2O96020 404 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 TRIM21P19474 475 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 RPL13P26373 211 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 HNRNPH3P31942 346 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 RARRES1P49788 294 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 MAPK7Q13164 816 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 PPIL2Q13356 520 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 MTF1Q14872 753 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 TSR1Q2NL82 804 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 PADI6Q6TGC4 694 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 ZNF720Q7Z2F6 126 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 SMAP1Q8IYB5 467 aaPredicted RBP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 MYCT1Q8N699 235 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 STRA6Q9BX79 667 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 MOV10L1Q9BXT6 1211 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 ANKEF1Q9NU02 776 aa15.79■□□□□ 0.12
RTFDC1-201ENST00000023939 ASTN1O14525 1302 aa15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 SPATA31C2B4DYI2 1134 aa15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 RGS20O76081 388 aa15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 PRPF6O94906 941 aaKnown RBP15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 GCNT3O95395 438 aa15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 KCNA2P16389 499 aa15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 NR2F2P24468 414 aa15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 ZNF397Q8NF99 534 aaPredicted RBP15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 ELP3Q9H9T3 547 aa15.78■□□□□ 0.12
RTFDC1-201ENST00000023939 PPP1R37O75864 691 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 ICAM3P32942 547 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 ALCAMQ13740 583 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 PLS1Q14651 629 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 GNPTABQ3T906 1256 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 WDR59Q6PJI9 974 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 DAW1Q8N136 415 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 TMEM174Q8WUU8 243 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 METTL14Q9HCE5 456 aaKnown RBP15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 BTBD7Q9P203 1132 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 SAMM50Q9Y512 469 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 PCDHB13Q9Y5F0 798 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms