RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 DgkkE9Q7N4 1118 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ppef2O35385 757 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Sema3fO88632 785 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 D1Pas1P16381 660 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 PltpP55065 493 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 GabpaQ00422 454 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Lmntd2Q0VET5 664 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 RilpQ5ND29 369 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Mapk4Q6P5G0 583 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Peg10Q7TN75 958 aaKnown RBP10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Tmc4Q7TQ65 694 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gprasp2Q8BUY8 826 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Kbtbd13Q8C828 458 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Mrgprx1Q8CIP3 322 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ubxn2aQ99KJ0 258 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Sh3bp5lQ99LH9 392 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Fthl17aQ9DAX0 182 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Pcdh11xF6ZNL5 1338 aa10.22□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Cul4bA2A432 970 aaKnown RBP10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ccdc6D3YZP9 469 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gm4307E9PZY4 289 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gm4312K9J7E2 289 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ctnnd1P30999 938 aaKnown RBP10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Actn4P57780 912 aaKnown RBP10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Atp8b1Q148W0 1251 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Actn1Q7TPR4 892 aaKnown RBP10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Nacc1Q7TSZ8 514 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Cyp26b1Q811W2 512 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Spata32Q8C5V0 334 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Lman1lQ8VCD3 505 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Q922C1 641 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Pla2g12bQ99P27 195 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Scyl1Q9EQC5 806 aaKnown RBP10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Bnip3lQ9Z2F7 218 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Fem1bQ9Z2G0 627 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Camta1A2A891 1682 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Cfap70D3YVL2 1141 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Olfr552E9Q545 317 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gm3127E9Q9P5 263 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gm3453K7N724 263 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 AgtP11859 477 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Caprin2Q05A80 1031 aaKnown RBP10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Zscan2Q07230 614 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Stxbp2Q64324 593 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Tbc1d30Q69ZT9 766 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Inpp5bQ8K337 993 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Olfr805Q8VFI4 319 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 StambpQ9CQ26 424 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 NenfQ9CQ45 171 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 RnmtQ9D0L8 465 aaKnown RBP10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 3830403N18RikQ9D6C3 208 aa10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 SmapQ9R0P4 181 aaKnown RBP10.21□□□□□ -0.77
Ldlr-202ENSMUST00000213114 GakQ99KY4 1305 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Cfap221A9Q751 836 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Becn2P0DM65 447 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Mcl1P97287 331 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Plekha7Q3UIL6 1118 aaKnown RBP10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Tigd5Q499M4 642 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Txndc5Q91W90 417 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 CalcbQ99MP3 130 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Josd2Q9CR30 188 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Serpinb3bQ9D1Q5 387 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Drap1Q9D6N5 205 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 PycardQ9EPB4 193 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Snx1Q9WV80 522 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Peg12Q9WVA7 283 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Cacna2d3Q9Z1L5 1091 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Cib2Q9Z309 187 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Shank2Q80Z38 1476 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Arap3Q8R5G7 1538 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Trove2O08848 538 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Men1O88559 611 aaKnown RBP10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 ItgaeQ60677 1167 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Grm4Q68EF4 912 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Dcaf15Q6PFH3 600 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Clca4aQ6Q473 924 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Daam2Q80U19 1115 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Dlg1Q811D0 905 aaKnown RBP10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Gga3Q8BMI3 718 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Bbs7Q8K2G4 715 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Tekt2Q922G7 430 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Smc6Q924W5 1097 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 1700016D06RikQ9DAA5 166 aa10.21□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Slit2Q9R1B9 1521 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Etnk2A7MCT6 385 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ap1g2O88512 791 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Cyp2e1Q05421 493 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Nsun7Q14AW5 724 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Gm2163Q6PCY5 473 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 DaglaQ6WQJ1 1044 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Tube1Q9D6T1 475 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Zfyve19Q9DAZ9 389 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 AatfQ9JKX4 526 aaKnown RBP10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Klra10Q9R1G6 266 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Adgrf5G5E8Q8 1348 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 C87977A2A958 498 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Nova2D3YVV7 556 aaKnown RBP10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Gm3415J3QMS8 315 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Clcn6O35454 870 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Aco1P28271 889 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms