RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Pfdn4Q3UWL8 134 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Ireb2Q811J3 963 aaKnown RBP14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Hps3Q91VB4 1002 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Cdk5rap3Q99LM2 503 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Cox16Q9CR63 106 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Ddx25Q9QY15 484 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 EsrraO08580 422 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Krt10P02535 570 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Ces1eQ64176 562 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Atp6v0d2Q80SY3 350 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Med15Q924H2 789 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 3830403N18RikQ9D6C3 208 aa14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Hic2Q9JLZ6 619 aaKnown RBP14.27□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Ptpn23Q6PB44 1692 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Trim5E9PV98 497 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Alppl2P24823 529 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Q3KNL4 93 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Dpcr1Q3TNW5 500 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Qrich1Q3UA37 777 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Gucy2fQ5SDA5 1108 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Prr18Q6PAN7 307 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Pcdhb14Q6PB90 796 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 RubcnQ80U62 956 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Ppm1kQ8BXN7 372 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Crb1Q8VHS2 1405 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Gm29133A0A1B0GT72 266 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Mmrn1B2RPV6 1210 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Sec24cG3X972 1096 aaKnown RBP14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Tcp11Q01755 566 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Pabpc4Q6PHQ9 660 aaKnown RBP14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Pramel6Q810Y9 485 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Styxl1Q9DAR2 321 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Klhl34A2AI76 644 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Stat4P42228 749 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Slc9a1Q61165 820 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Hoxa13Q62424 386 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Zrsr1Q64707 428 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 AdalQ80SY6 360 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Lig4Q8BTF7 911 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 NalcnQ8BXR5 1738 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Phf20l1Q8CCJ9 1013 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 AdarQ99MU3 1178 aaKnown RBP14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Mfap3lQ9D3X9 409 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Ifi35Q9D8C4 286 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Lrriq4A6H6A4 596 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Frmd8Q3UFK8 466 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Tmem60Q8K174 133 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 SmtnQ921U8 923 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Polr3eQ9CZT4 710 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Cul1Q9WTX6 776 aa14.26□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Wdr36Q3TAQ9 899 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 GypcQ78HU7 95 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Palm2Q8BR92 376 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Wbp11Q923D5 641 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Add3Q9QYB5 706 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Adssl1P28650 457 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 G3bp2P97379 482 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Runx2Q08775 607 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Sult1d1Q3UZZ6 295 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Senp6Q6P7W0 1132 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 L3mbtl3Q8BLB7 883 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Scfd1Q8BRF7 639 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 LRWD1Q8BUI3 648 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Amigo3Q8C2S7 508 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Prdm2A2A7B5 1709 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Casp8O89110 480 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Trim72Q1XH17 477 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Cyp11b1Q3TG86 501 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Khdrbs1Q60749 443 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Oxsr1Q6P9R2 527 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Taco1Q8K0Z7 294 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Rnf112Q96DY5 654 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 1700109H08RikQ9D9C0 210 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Atp11aP98197 1187 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Satb1Q60611 764 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Dclk2Q6PGN3 756 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Dpp9Q8BVG4 862 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Gnl3Q8CI11 538 aaKnown RBP14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Tgs1Q923W1 853 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Nuf2Q99P69 463 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Pold3Q9EQ28 462 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Cyth1Q9QX11 398 aa14.25□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Nova2D3YVV7 556 aaKnown RBP14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Vmn2r79E9Q067 851 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 IkbkbO88351 757 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Slc30a9Q5IRJ6 567 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Krt40Q6IFX3 439 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Snx19Q6P4T1 997 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 PodnQ7TQ62 611 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Osbpl2Q8BX94 484 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Fbxo18Q8K2I9 1042 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Alpk1Q9CXB8 1231 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Polr3cQ9D483 533 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Llcfc1Q9D9P8 108 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 PycardQ9EPB4 193 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Spef2Q8C9J3 1734 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Ccdc194A0A140LIT1 234 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 SfnO70456 248 aaKnown RBP14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 E2f8Q58FA4 860 aa14.24□□□□□ -0.13
Rnf40-202ENSMUST00000205694 Zbtb17Q60821 794 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms