RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 1700129C05RikQ9CQ77 218 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Tekt1Q9DAJ2 418 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Tmem131O70472 1877 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Gm4907B1AXB9 411 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Brpf3B2KF05 1204 aaKnown RBP13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 AurkbO70126 345 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 PrkceP16054 737 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Tal1P22091 329 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Bcat1P24288 386 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Cep126Q0VBV7 1103 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Fez2Q6TYB5 348 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 OtoaQ8K561 1137 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Cd70O55237 195 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Slc16a2O70324 545 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Orc4O88708 433 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Il2rbP16297 539 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Rbp3P49194 1234 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Fam214aQ69ZK7 1075 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Oxsr1Q6P9R2 527 aa13.55□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Gm7168A0AUV4 508 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Klhl34A2AI76 644 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Hmx1O70218 332 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Cd68P31996 326 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Usp13Q5BKP2 858 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Fkbp3Q62446 224 aaKnown RBP13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 VwdeQ6DFV8 926 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Serpinb3dQ6UKZ0 387 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Ipo5Q8BKC5 1097 aaKnown RBP13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Mrgprx1Q8CIP3 322 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 HyiQ8R1F5 277 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 RnmtQ9D0L8 465 aaKnown RBP13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Cep72Q9D3R3 646 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 RptorQ8K4Q0 1335 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Hoxd10P28359 340 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Cyp2c39P56656 490 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Irf3P70671 419 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Etv6P97360 485 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Tarbp2P97473 365 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Ica1lQ3TY65 431 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Rsad1Q5SUV1 442 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Ppp1r13bQ62415 1087 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Tspan8Q8R3G9 235 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Rpn1Q91YQ5 608 aaKnown RBP13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Tas1r1Q99PG6 842 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Mss51Q9D5Z5 446 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Baiap2l1Q9DBJ3 514 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 AatfQ9JKX4 526 aaKnown RBP13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Dctpp1Q9QY93 170 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Sucla2Q9Z2I9 463 aa13.54□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Idh1O88844 414 aaKnown RBP13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Epb41l4aP52963 686 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Txndc16Q7TN22 820 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Sdccag8Q80UF4 717 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Sox30Q8CGW4 782 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Celf3Q8CIN6 465 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Cacnb1Q8R3Z5 597 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Kdm8Q9CXT6 414 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Pidd1Q9ERV7 915 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 LctF8VPT3 1931 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Grin2dQ03391 1323 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Nup210lQ9D2F7 1881 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 SktA2AQ25 1946 aaKnown RBP13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Lcmt1A0A0U1RNF2 332 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Map7d2A2AG50 781 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Ace3D0G895 737 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Casp7P97864 303 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Mansc4Q3UU94 337 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Taf3Q5HZG4 932 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Msantd2Q6NZR2 559 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Rexo1Q7TT28 1213 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Rpap2Q8VC34 614 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Tor1aip1Q921T2 595 aaKnown RBP13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Smco2Q9DA21 347 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Zkscan5Q9Z1D8 819 aa13.53□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Cul4bA2A432 970 aaKnown RBP13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Ttll6A4Q9E8 822 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Zkscan7E9PVW1 718 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Got1P05201 413 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Cdkn1cP49919 348 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 ZbbxQ0P5X5 716 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Ccdc162pQ0VG85 912 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Foxn3Q499D0 457 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Srd5a1Q68FF9 255 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Adck2Q6NSR3 617 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Zfp397Q7TNK4 527 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 GldcQ91W43 1025 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 MymkQ9D1N4 221 aa13.52□□□□□ -0.24
Ddx55-202ENSMUST00000111438 Gm4307E9PZY4 289 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Gm4312K9J7E2 289 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Tlk2O55047 718 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Kiaa1211Q5PR69 1207 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Mybpc2Q5XKE0 1136 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Samhd1Q60710 627 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Dhx40Q6PE54 779 aaKnown RBP13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Plppr4Q7TME0 766 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Zbtb5Q7TQG0 670 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Q8BZJ8 459 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Map1sQ8C052 973 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Apol10aQ8CCA5 318 aa13.52□□□□□ -0.25
Ddx55-202ENSMUST00000111438 Psmd2Q8VDM4 908 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms