RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Gm5935Q497S0 212 aa12.56□□□□□ -0.4
Vps54-202ENSMUST00000109578 Pcsk7Q61139 770 aa12.56□□□□□ -0.4
Vps54-202ENSMUST00000109578 Nr2e1Q64104 385 aa12.56□□□□□ -0.4
Vps54-202ENSMUST00000109578 Dhx58Q99J87 678 aa12.56□□□□□ -0.4
Vps54-202ENSMUST00000109578 PpihQ9D868 188 aa12.56□□□□□ -0.4
Vps54-202ENSMUST00000109578 Nap1l5Q9JJF0 156 aa12.56□□□□□ -0.4
Vps54-202ENSMUST00000109578 Pja1O55176 578 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Eif3hQ91WK2 352 aaKnown RBP12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Tnip1Q9WUU8 647 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Sept3Q9Z1S5 350 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Fam71aB7XG49 585 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Nmt1O70310 496 aaKnown RBP12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Tnnc1P19123 161 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Gna14P30677 355 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Atp6v1aP50516 617 aaKnown RBP12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Opa1P58281 960 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Znf697Q569E7 569 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Vmn1r209Q5NC97 312 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 E2f5Q61502 335 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Ankrd13dQ6PD24 605 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Micall1Q8BGT6 870 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 F11Q91Y47 624 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Arhgef7Q9ES28 862 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 GgcxQ9QYC7 757 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Eif2ak1Q9Z2R9 619 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Klhdc7aA2APT9 773 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Zfp213E9QAW0 468 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Clcn6O35454 870 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Lmnb2P21619 596 aaKnown RBP12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Znf367Q0VDT2 340 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Epha7Q61772 998 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Six2Q62232 296 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Pym1Q8CHP5 203 aaKnown RBP12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Ces4aQ8R0W5 563 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Rabl3Q9D4V7 236 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Phtf1Q9QZ09 761 aa12.55□□□□□ -0.4
Vps54-202ENSMUST00000109578 Usp17lbE9Q9U0 468 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 CraddO88843 199 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Mpp3O88910 568 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Mucl2P02815 138 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Kctd16Q5DTY9 427 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Mybpc2Q5XKE0 1136 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Git1Q68FF6 770 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Znf771Q8BJ90 317 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Zcrb1Q9CZ96 217 aaKnown RBP12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Acsl3Q9CZW4 720 aaKnown RBP12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 PdhbQ9D051 359 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Mtmr2Q9Z2D1 643 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Ctnnd1P30999 938 aaKnown RBP12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Tsga10Q6NY15 697 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Rassf2Q8BMS9 326 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Taok3Q8BYC6 898 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Ccdc87Q8CDL9 855 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Rpap2Q8VC34 614 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Myh10Q61879 1976 aaKnown RBP12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Trim55G3X8Y1 545 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 FechP22315 420 aaKnown RBP12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Tspyl3Q3UYP3 334 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Rasa3Q60790 834 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Acad11Q80XL6 779 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Ms4a5Q810P8 197 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Proca1B0QZF7 307 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 TyrobpO54885 114 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Senp1P59110 640 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 RelaQ04207 549 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Tatdn3Q3U1C6 294 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 FtoQ8BGW1 502 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Snip1Q8BIZ6 383 aaKnown RBP12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 PolrmtQ8BKF1 1207 aaKnown RBP12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 MslnlQ8C160 685 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Zkscan3Q91VW9 553 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Coa7Q921H9 231 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Dph5Q9CWQ0 281 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 ArcQ9WV31 396 aa12.54□□□□□ -0.4
Vps54-202ENSMUST00000109578 Ttll10A4Q9F3 704 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Adam7O35227 789 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Becn2P0DM65 447 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Nedd1P33215 660 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Epb41l4aP52963 686 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Large2Q5XPT3 690 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Tspyl5Q69ZB3 406 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Pstpip2Q99M15 334 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Prpf4Q9DAW6 521 aaKnown RBP12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Eid1Q9DCR4 169 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Znf704Q9ERQ3 566 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Mcm5P49718 733 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Brip1Q5SXJ3 1174 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Best3Q6H1V1 669 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 CnstQ8CBC4 711 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Tesk2Q8VCT9 570 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Azi2Q9QYP6 405 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Slfn14V9GXG1 899 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 DtnbO70585 659 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Il13ra2O88786 383 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 H2afzP0C0S6 128 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Ctnna1P26231 906 aaKnown RBP12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Usp4P35123 962 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 H2afvQ3THW5 128 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Pla2g4eQ50L42 875 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Msl1Q6PDM1 616 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms