RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Atg16l1Q8C0J2 607 aa16.83■□□□□ 0.29
Shank1-201ENSMUST00000107934 Afg3l2Q8JZQ2 802 aaKnown RBP16.83■□□□□ 0.29
Shank1-201ENSMUST00000107934 Abhd8Q8R0P8 439 aa16.83■□□□□ 0.29
Shank1-201ENSMUST00000107934 L1camP11627 1260 aa16.83■□□□□ 0.29
Shank1-201ENSMUST00000107934 Igfbp4P47879 254 aa16.83■□□□□ 0.29
Shank1-201ENSMUST00000107934 Snx14Q8BHY8 964 aa16.83■□□□□ 0.29
Shank1-201ENSMUST00000107934 ErmardE9Q048 622 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Sdf4Q61112 361 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Jade1Q6ZPI0 834 aaKnown RBP16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Clec16aQ80U30 1036 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Nod1Q8BHB0 953 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Zfp317Q8C0Q5 607 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ophn1Q99J31 802 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 4933428M09RikQ9D3X3 192 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Mfap3lQ9D3X9 409 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Fndc1E9Q043 1732 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Gbp6A0A0G2JDV3 611 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Mmrn1B2RPV6 1210 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Gm43302L7N1X8 611 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Anks1aP59672 1150 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Rasgrf2P70392 1189 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Nsun7Q14AW5 724 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Taco1Q8K0Z7 294 aaKnown RBP16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Dppa3Q8QZY3 150 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Tktl2Q9D4D4 627 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ttc38A3KMP2 465 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Gm2237E9Q501 211 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Gm3591K7N6X2 186 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Pla2g4aP47713 748 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ccdc154Q6RUT8 657 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Tbc1d22bQ80VE5 505 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Cyp2d12Q8BVD2 504 aa16.83■□□□□ 0.28
Shank1-201ENSMUST00000107934 Stat3P42227 770 aaKnown RBP16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ppp1r7Q3UM45 361 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 SybuQ8BHS8 665 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ppm1kQ8BXN7 372 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ccdc159Q8C963 411 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 C87977A2A958 498 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Uba6Q8C7R4 1053 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Nkiras1Q8CEC5 192 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Alpk1Q9CXB8 1231 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ybx3Q9JKB3 361 aaKnown RBP16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Usp35M0QWN7 1009 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Gnrh1P13562 90 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 E330017A01RikQ8BU47 192 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 AdarQ99MU3 1178 aaKnown RBP16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Rbm31yQ9D3U4 565 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Add3Q9QYB5 706 aaKnown RBP16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 SmapQ9R0P4 181 aaKnown RBP16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Cul7Q8VE73 1689 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Cyp3a59D3Z2W7 503 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Rad51ap2G3UW63 976 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Runx2Q08775 607 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ccdc97Q9DBT3 340 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Gm21962L7N280 338 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Nck2O55033 380 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 AdalQ80SY6 360 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Rtn3Q9ES97 964 aa16.82■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ttc41Q692V3 1318 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 AK157302I3ITR1 129 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ush1gQ80T11 461 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Fbxo44Q8BK26 255 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Frmd4bQ920B0 1035 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Isca1Q9D924 129 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Rabgap1A2AWA9 1064 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Zc3h7bF8VPP8 982 aaKnown RBP16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ext2P70428 718 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Fam81aQ3UXZ6 364 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Tmed1Q3V009 227 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Satb1Q60611 764 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Tlr3Q99MB1 905 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Rrp15Q9CYX7 281 aaKnown RBP16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Thumpd3P97770 505 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Trim72Q1XH17 477 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Scnn1aQ61180 699 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Gprasp2Q8BUY8 826 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Sytl1Q99N80 567 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Rbp7Q9EPC5 134 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Maged2Q9ER67 616 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Pabpc1lA2A5N3 607 aaKnown RBP16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Acad12D3Z7X0 555 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 EsrraO08580 422 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ccdc84Q4VA36 332 aaKnown RBP16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 AmphQ7TQF7 686 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Tcp11l2Q8K1H7 517 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Plekhg4A0A1L1SU27 1217 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Ptk2P34152 1090 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Atp9bP98195 1146 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Sult1d1Q3UZZ6 295 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Pabpc4Q6PHQ9 660 aaKnown RBP16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Polr3fQ921X6 316 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Slc13a1Q9JHI4 594 aa16.81■□□□□ 0.28
Shank1-201ENSMUST00000107934 Slc3a2P10852 526 aaKnown RBP16.8■□□□□ 0.28
Shank1-201ENSMUST00000107934 Mark2Q05512 776 aa16.8■□□□□ 0.28
Shank1-201ENSMUST00000107934 Otud5Q3U2S4 566 aa16.8■□□□□ 0.28
Shank1-201ENSMUST00000107934 Fnbp1Q80TY0 616 aa16.8■□□□□ 0.28
Shank1-201ENSMUST00000107934 Vstm4T1NXB5 319 aa16.8■□□□□ 0.28
Shank1-201ENSMUST00000107934 Gm29133A0A1B0GT72 266 aa16.8■□□□□ 0.28
Shank1-201ENSMUST00000107934 Lmntd2Q0VET5 664 aa16.8■□□□□ 0.28
Shank1-201ENSMUST00000107934 MlxipQ2VPU4 917 aa16.8■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms