RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Sertad2Q9JJG5 309 aa17.52■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Prpf40aQ9R1C7 953 aaKnown RBP17.52■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Rps6ka1P18653 724 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ccdc114Q3UX62 658 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Dph1Q5NCQ5 438 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Lamc2Q61092 1191 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Vipas39Q8BGQ1 491 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 WdpcpQ8C456 722 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 PpanQ91YU8 470 aaKnown RBP17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Cdc42ep4Q9JM96 349 aaKnown RBP17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Usp14Q9JMA1 493 aaKnown RBP17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 1700017N19RikA0A087WPJ1 469 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Gm1758F6VZZ1 202 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Klra9Q2TJJ8 266 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Gm5935Q497S0 212 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Styxl1Q9DAR2 321 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Orc1Q9Z1N2 840 aaKnown RBP17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Zfp831A2ADM8 1628 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Smchd1Q6P5D8 2007 aaKnown RBP17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Hoxa11P31311 313 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Wee1P47810 646 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Etv6P97360 485 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Krt35Q497I4 455 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Scarf1Q5ND28 820 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Gas7Q60780 421 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Usp17leQ7M764 540 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 GopcQ8BH60 463 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Gm11983V9GXS8 105 aa17.51■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Gm45261A0A1B0GSP6 197 aa17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Zfp174B9EJW5 407 aa17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Drd5Q8BLD9 478 aa17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Gpr180Q8BPS4 441 aa17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Zhx2Q8C0C0 836 aaKnown RBP17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Dusp19Q8K4T5 220 aa17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Sgms1Q8VCQ6 419 aa17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Krt15Q61414 452 aa17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Swap70Q6A028 585 aaKnown RBP17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Pym1Q8CHP5 203 aaKnown RBP17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ssr1Q9CY50 286 aaKnown RBP17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ribc1Q9D0B8 379 aa17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Pabpc6Q9D4E6 643 aaKnown RBP17.5■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Atp13a3Q5XF89 1219 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 KaznQ69ZS8 779 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Slc51bQ80WK2 128 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Dph5Q9CWQ0 281 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Fam187aQ9D3R5 417 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 4931423N10RikQ9D4J9 382 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 CnpP16330 420 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 ArP19091 899 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Rpl13P47963 211 aaKnown RBP17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Tatdn3Q3U1C6 294 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 BcrQ6PAJ1 1270 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Tesk2Q8VCT9 570 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Slc25a38Q91XD8 326 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 PccaQ91ZA3 724 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Q9DAQ4 598 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 EmcnQ9R0H2 261 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Tjp2Q9Z0U1 1167 aaKnown RBP17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ttll10A4Q9F3 704 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Zfp213E9QAW0 468 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Folh1O35409 752 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Nr1i3O35627 358 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 CraddO88843 199 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 FosP01101 380 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Sfi1Q3UZY0 1216 aaKnown RBP17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Tigd5Q499M4 642 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ift20Q61025 132 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Borcs6Q9D6W8 360 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Capn12Q9ER56 720 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Myo1cQ9WTI7 1063 aa17.49■□□□□ 0.39
Ckap4-201ENSMUST00000053871 DtnbO70585 659 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Acad11Q80XL6 779 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 IarsQ8BU30 1262 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Chn1Q91V57 459 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Nxnl2Q9D531 156 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Gimap9G3X987 291 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Mier3Q3UHF3 551 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Kif5bQ61768 963 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Zrsr2Q62377 462 aaKnown RBP17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Tmem132dQ76HP3 1097 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 TbataQ7TSD4 393 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Trim6Q8BGE7 488 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Arl2bpQ9D385 163 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Angptl3Q9R182 455 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 ArcQ9WV31 396 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ppp2r3dQ9Z176 491 aa17.48■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Got1P05201 413 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Epb41l4aP52963 686 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Klrg2Q3UM83 387 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Rsad1Q5SUV1 442 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Epha7Q61772 998 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 R3hdm2Q80TM6 1044 aaKnown RBP17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Q91Z58 1206 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 GzmnQ920S1 248 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ddx47Q9CWX9 455 aaKnown RBP17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Eya4Q9Z191 616 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Rad51bO35719 350 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Il27raO70394 623 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ccdc84Q4VA36 332 aaKnown RBP17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Sco1Q5SUC9 284 aa17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms