RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Trak2Q6P9N8 913 aa23.38■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Zbtb5Q7TQG0 670 aa23.38■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Crb2Q80YA8 1282 aa23.38■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Mrps25Q9D125 171 aaKnown RBP23.38■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Gm45861A0A1B0GRY3 1923 aa23.38■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Abcb11Q9QY30 1321 aa23.38■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Slc23a4A0A0J9YUX7 615 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Zfp213E9QAW0 468 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 2610008E11RikG3X964 669 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 UgcgO88693 394 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Cd22P35329 862 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Il1rapl1P59823 695 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Arhgef19Q8BWA8 802 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Lrrd1Q8C0R9 853 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Ca12Q8CI85 354 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Ces4aQ8R0W5 563 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Olfr397Q8VEZ6 315 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Pcdhb12Q91Y07 789 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Spred2Q924S7 410 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Iqca1Q9CUL5 857 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Asah2Q9JHE3 756 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Ppp2r3dQ9Z176 491 aa23.37■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Ccdc112A0AUP1 442 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Hhla1Q3TYV2 514 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Dll1Q61483 722 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Gas6Q61592 674 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Epha7Q61772 998 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Tgoln2Q62314 363 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 IqcgQ80W32 419 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Cep85Q8BMK0 761 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Zmynd15Q8C0R7 736 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Casp8ap2Q9WUF3 1962 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Gm5134E9QAB5 671 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Diaph1O08808 1255 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 PrkceP16054 737 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Grin1P35438 938 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 PklrP53657 574 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Psmc5P62196 406 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Gtf3c3Q3TMP1 882 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Mettl14Q3UIK4 456 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Inppl1Q6P549 1257 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Tmem202Q80W35 275 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Gtf2a2Q80ZM7 109 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 F13a1Q8BH61 732 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 AacsQ9D2R0 672 aa23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Fxr2Q9WVR4 673 aaKnown RBP23.36■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Cd86P42082 309 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Ccr1P51675 355 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Nfe2Q07279 373 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Rufy4Q3TYX8 563 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Lrrc55Q3UY51 311 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 P3h1Q3V1T4 739 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Q5XFZ0 217 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Gemin4Q6P6L6 1058 aaKnown RBP23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Serpinb3dQ6UKZ0 387 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Sestd1Q80UK0 696 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Cdca8Q8BHX3 289 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 4933409G03RikQ8C5U0 320 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 ClmnQ8C5W0 1052 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Grin3bQ91ZU9 1003 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Syt17Q920M7 470 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Mcoln1Q99J21 580 aa23.35■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Fam124aD3Z5V4 536 aa23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Znf653Q6YND2 615 aa23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Slc17a8Q8BFU8 601 aa23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Rbm34Q8C5L7 375 aaKnown RBP23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Lmbrd1Q8K0B2 537 aa23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Ifih1Q8R5F7 1025 aa23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Snrnp35Q9D384 244 aa23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Add3Q9QYB5 706 aaKnown RBP23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Acot9Q9R0X4 439 aaKnown RBP23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Mtmr1Q9Z2C4 669 aa23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Rp1l1Q8CGM2 1859 aa23.34■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Kif3aP28741 701 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Tap2P36371 702 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Kcnma1Q08460 1209 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Pcdhb14Q6PB90 796 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Csrnp2Q8BGQ2 534 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Haus7Q8BKT8 364 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 MylipQ8BM54 445 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 PisdQ8BSF4 406 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Neu4Q8BZL1 478 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 FcrlaQ920A9 352 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Drc3Q9D5E4 523 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Mkrn2Q9ERV1 416 aaKnown RBP23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Lmbr1Q9JIT0 490 aa23.33■■□□□ 1.33
Ssbp4-201ENSMUST00000049908 Gm3252E9PUT9 216 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Gm3468E9QAJ8 216 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Apba3O88888 571 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Tulp2P46686 562 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Pnma1Q8C1C8 353 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 NptxrQ99J85 493 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 LpxnQ99N69 386 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Scrn1Q9CZC8 414 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Stxbp4Q9WV89 557 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Extl3Q9WVL6 918 aa23.32■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Clk2O35491 499 aa23.31■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Tpd52l1O54818 204 aa23.31■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 SPINDOCQ05AH6 381 aa23.31■■□□□ 1.32
Ssbp4-201ENSMUST00000049908 Hdac4Q6NZM9 1076 aa23.31■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms