RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Ccdc50Q810U5 305 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 LRWD1Q8BUI3 648 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Eif3cQ8R1B4 911 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Them5Q9CQJ0 248 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gadd45gQ9Z111 159 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Akap5D3YVF0 745 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Eno3P21550 434 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Hspa8P63017 646 aaKnown RBP10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cyp11b1Q3TG86 501 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Skiv2lQ6NZR5 1244 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Usp44Q8C2S0 711 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 CtsqQ91ZF4 343 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pramef12Q9D2F1 463 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Syngap1F6SEU4 1340 aa10.55□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ttc38A3KMP2 465 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Adprhl2Q8CG72 370 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 PycardQ9EPB4 193 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ercc4Q9QZD4 917 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Krt26Q3TRJ4 462 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Znf827Q505G8 1078 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cyp4x1Q6A152 507 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Haus7Q8BKT8 364 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Srp68Q8BMA6 625 aaKnown RBP10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rbm31yQ9D3U4 565 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Serpina9Q9D7D2 418 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cpsf3Q9QXK7 684 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tcp11x2A2AEI7 503 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Atp2c2A7L9Z8 944 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ifi207E9Q3L4 978 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cacnb3P54285 484 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Lrig2Q52KR2 1054 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Sdf4Q61112 361 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm5622Q810Q0 167 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Serpinb10Q8K1K6 397 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 1700013H16RikQ9DAC5 291 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tmtc1Q3UV71 942 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Vav2Q60992 868 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Myo6Q64331 1265 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Znf507Q6ZPY5 941 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 SybuQ8BHS8 665 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Stk11Q9WTK7 436 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Plch2A2AP18 1501 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Arhgap4B1AUY3 965 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Snx12O70493 165 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Lrch1P62046 709 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Prmt9Q3U3W5 846 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ccdc185Q3V118 621 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Sh3gl3Q62421 347 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rpf1Q7TND5 349 aaKnown RBP10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ces1dQ8VCT4 565 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fbxo3Q9DC63 480 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rtn3Q9ES97 964 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tmem47Q9JJG6 181 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Large1Q9Z1M7 756 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tarbp1E9Q368 1579 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Map3k4O08648 1597 aa10.54□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm9774A0A0A6YVU8 407 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Zfp804bA0A0G2JGH6 1343 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cyp3a59D3Z2W7 503 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ccna1Q61456 421 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 PhkbQ7TSH2 1085 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ttc26Q8BS45 554 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 McamQ8R2Y2 648 aaKnown RBP10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 PdhbQ9D051 359 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tmod3Q9JHJ0 352 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Hyou1Q9JKR6 999 aaKnown RBP10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm45261A0A1B0GSP6 197 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pja1O55176 578 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cdh15P33146 784 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ptk2P34152 1090 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ext2P70428 718 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gjb6P70689 261 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Tpd52Q62393 224 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Zrsr1Q64707 428 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Nlrp4fQ66X05 959 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Phactr3Q8BYK5 558 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Polr3cQ9D483 533 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Llcfc1Q9D9P8 108 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Trp53inp1Q9QXE4 239 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gap43P06837 227 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pla2g4bP0C871 782 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 EgfrQ01279 1210 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ect2Q07139 913 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Qrich1Q3UA37 777 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Serpina3bQ8BYY9 420 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Trim35Q8C006 501 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Klhl11Q8CE33 709 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ero1aQ8R180 464 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Arhgef7Q9ES28 862 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Prdm2A2A7B5 1709 aaKnown RBP10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Myo3aQ8K3H5 1613 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rtl9Q32KG4 1339 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fam167bP17257 162 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pdha1P35486 390 aaKnown RBP10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Rasgrf2P70392 1189 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Nme8Q715T0 586 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Q8C5C9 218 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Morc2bQ8C5W4 1022 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Med15Q924H2 789 aa10.53□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ccdc97Q9DBT3 340 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms