RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Phactr4Q501J7 694 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tktl2Q9D4D4 627 aa12.27□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Med1Q925J9 1575 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Fgd3O88842 733 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Traf5P70191 558 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Krt31Q61765 416 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Znf18Q810A1 556 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Lin9Q8C735 542 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cdk8Q8R3L8 464 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pstpip2Q99M15 334 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cmtr1Q9DBC3 837 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pdcd7Q9WTY1 482 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Parp2O88554 559 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Mgat1P27808 447 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Usp4P35123 962 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cpa1Q7TPZ8 419 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Dlg1Q811D0 905 aaKnown RBP12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 P3h4Q8K2B0 443 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cul5Q9D5V5 780 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 MetP16056 1379 aa12.27□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Wdr72D3YYM4 1114 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ptpn12P35831 775 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Hcls1P49710 486 aaKnown RBP12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Q3TTJ4 293 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Taok3Q8BYC6 898 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Mxra7Q9CZH7 178 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gm3127E9Q9P5 263 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Kcnk16G5E845 292 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gm3453K7N724 263 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 SpertQ32MG2 446 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 HarsQ61035 509 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Trim21Q62191 470 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Zbtb7bQ64321 544 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Lzts2Q91YU6 671 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Tor1aip1Q921T2 595 aaKnown RBP12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cdc42ep4Q9JM96 349 aaKnown RBP12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ift81O35594 676 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Adcy8P97490 1249 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Dab2P98078 766 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Mex3cQ05A36 652 aaKnown RBP12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ttbk2Q3UVR3 1243 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gigyf2Q6Y7W8 1291 aaKnown RBP12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 L3mbtl3Q8BLB7 883 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Tmem120aQ8C1E7 343 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 C130026I21RikQ8C898 291 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Mrpl12Q9DB15 201 aaKnown RBP12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Usp14Q9JMA1 493 aaKnown RBP12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Oip5A2AQ14 241 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Olfr310B2RVZ1 332 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Fam129cD3YZB0 591 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Miga1Q4QQM5 600 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Spata24Q6P926 205 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cwf19l1Q8CI33 537 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Dnajc3Q91YW3 504 aa12.26□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Casp14O89094 257 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 DnttP09838 530 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Kcnma1Q08460 1209 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Map3k12Q60700 888 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Lrrc42Q8R2U7 421 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Bap1Q99PU7 728 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 RnmtQ9D0L8 465 aaKnown RBP12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cpb1B2RS76 415 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ect2Q07139 913 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Zc3h18Q0P678 948 aaKnown RBP12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Palb2Q3U0P1 1104 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Krt35Q497I4 455 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Snx14Q8BHY8 964 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pex19Q8VCI5 299 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 MesdQ9ERE7 224 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gm4297D3YWB7 211 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Glra4Q61603 456 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Fam118bQ8C569 351 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 CnstQ8CBC4 711 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 MyripQ8K3I4 856 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Josd2Q9CR30 188 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Mrps9Q9D7N3 390 aaKnown RBP12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gtf2ird1Q9JI57 1104 aaKnown RBP12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Slc35g2D3YVE8 412 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Trappc3O55013 180 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pik3caP42337 1068 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Fam178bQ24JP3 464 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Adad1Q5SUE7 619 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ctnna2Q61301 953 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Bzw2Q91VK1 419 aaKnown RBP12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Dydc2Q9D3X8 139 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Tlr2Q9QUN7 784 aa12.25□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Fam171a1A2ATK9 892 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Atp1b3P97370 278 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 ItgaeQ60677 1167 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 ChukQ60680 745 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ldlrap1Q8C142 308 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 4931423N10RikQ9D4J9 382 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Drap1Q9D6N5 205 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Fbxo3Q9DC63 480 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Psmd10Q9Z2X2 231 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Klc1O88447 541 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Zfp42P22227 288 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Emc10Q3TAS6 258 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Vat1lQ80TB8 417 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Rbm41Q8JZV4 413 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms