RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Eif2aQ8BJW6 581 aaKnown RBP11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 HibchQ8QZS1 385 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Psmd6Q99JI4 389 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 ToporslQ9D2F8 683 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 MrgbpQ9DAT2 204 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Kcnq4Q9JK97 696 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Angptl3Q9R182 455 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Golga4Q91VW5 2238 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm1604bQ3TRG0 118 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Hdac4Q6NZM9 1076 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Hdac10Q6P3E7 666 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Tmem120aQ8C1E7 343 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 CnstQ8CBC4 711 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cpa5Q8R4H4 436 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Eef1gQ9D8N0 437 aaKnown RBP11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Stat2Q9WVL2 923 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Adgrf5G5E8Q8 1348 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Card9A2AIV8 536 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ces1aE9PYP1 563 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Eya3P97480 510 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 EregQ61521 162 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Sin3bQ62141 1098 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Rimbp2Q80U40 1072 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ccdc113Q8C5T8 377 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Sde2Q8K1J5 448 aaKnown RBP11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cul5Q9D5V5 780 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Col20a1Q923P0 1320 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Stox1B2RQL2 990 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 DgkkE9Q7N4 1118 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Stat3P42227 770 aaKnown RBP11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Rpl13P47963 211 aaKnown RBP11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 SftpbP50405 377 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Q6PD19 689 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cct8l1Q80YT3 562 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Pank4Q80YV4 820 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 BC048507Q80ZS7 89 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ephb1Q8CBF3 984 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Rabep2Q91WG2 554 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Spats2lQ91WJ7 558 aaKnown RBP11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Myo1hQ9D6A1 958 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Eid1Q9DCR4 169 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Tmem191cQ9JJB1 302 aa11.54□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Pde8aO88502 823 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Traf5P70191 558 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Zbtb7bQ64321 544 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Dzip3Q7TPV2 1204 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Camsap3Q80VC9 1252 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Trip10Q8CJ53 603 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 ParnQ8VDG3 624 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 AdnpQ9Z103 1108 aaKnown RBP11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Crb1Q8VHS2 1405 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cyp2c23E9Q5K4 494 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm21962L7N280 338 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Casp14O89094 257 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Rcn1Q05186 325 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ccna1Q61456 421 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Tpp2Q64514 1262 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Anapc5Q8BTZ4 740 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Trim52Q8CDV4 233 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Nup58Q8R332 587 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Pcdhgb4Q91XX6 912 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ggt7Q99JP7 662 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Psrc1Q9D0P7 329 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Kcnh2O35219 1162 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Lmnb2P21619 596 aaKnown RBP11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Stx2Q00262 289 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Pde1bQ01065 535 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Fam81aQ3UXZ6 364 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Sorbs1Q62417 1290 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gins2Q9D600 185 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gtf3c6Q9D8P7 227 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Pcsk1nQ9QXV0 258 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ddx25Q9QY15 484 aa11.53□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Usp31E9Q6Y8 1344 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Spag17Q5S003 2320 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ttc17E9PVB5 1198 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm3127E9Q9P5 263 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm3453K7N724 263 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cyp2j6O54750 501 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Il27raO70394 623 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Tlr13Q6R5N8 991 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Bsdc1Q80Y55 427 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ankrd23Q812A3 306 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ppp1r12bQ8BG95 976 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ppm1mQ8BU27 406 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Uba6Q8C7R4 1053 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Xpo6Q924Z6 1125 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Chordc1Q9D1P4 331 aaKnown RBP11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Spata17Q9D552 379 aa11.52□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Psmd14O35593 310 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 RcvrnP34057 202 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 EnahQ03173 802 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ncf1Q09014 390 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Nap1l4Q78ZA7 375 aaKnown RBP11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Clca2Q8BG22 942 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Vipas39Q8BGQ1 491 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Fbxo38Q8BMI0 1194 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Tor1aip1Q921T2 595 aaKnown RBP11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Pgm1Q9D0F9 562 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Slc13a1Q9JHI4 594 aa11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms