RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Lgi2Q8K4Z0 550 aa11.66□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Snx10Q9CWT3 201 aa11.66□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Togaram1Q6A070 1776 aaKnown RBP11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Myh10Q61879 1976 aaKnown RBP11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Nup188Q6ZQH8 1759 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Vmn2r79E9Q067 851 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Arhgap6O54834 987 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Fgd3O88842 733 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Ncf1Q09014 390 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Dpcr1Q3TNW5 500 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Znf697Q569E7 569 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Vmn1r209Q5NC97 312 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 PnocQ64387 187 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 WhrnQ80VW5 918 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Nop9Q8BMC4 636 aaKnown RBP11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Cog5Q8C0L8 829 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 PpanQ91YU8 470 aaKnown RBP11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Coa7Q921H9 231 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Tsnaxip1Q99P25 704 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Lpin2Q99PI5 893 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Ddx25Q9QY15 484 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Mroh9G5E8L9 891 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Ap1b1O35643 943 aaKnown RBP11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Sem1P60897 70 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Spata18Q0P557 537 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Rgl1Q60695 768 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 GnptabQ69ZN6 1235 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 SpidrQ8BGX7 933 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Morc2bQ8C5W4 1022 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Exd1Q8CDF7 570 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Ubxn6Q99PL6 442 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Slc5a5Q99PN0 618 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Lrrc57Q9D1G5 239 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Armc9Q9D2I5 817 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Azi2Q9QYP6 405 aa11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Rbm6S4R1W5 1118 aaKnown RBP11.65□□□□□ -0.54
Ptcd1-201ENSMUST00000031628 Zfp646Q6NV66 1788 aa11.65□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Sec14l1A8Y5H7 715 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Gm8298J3QPI0 401 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Akap2O54931 893 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Polr2fP61219 127 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Cep126Q0VBV7 1103 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Rasip1Q3U0S6 961 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Lrig2Q52KR2 1054 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Gbp4Q61107 620 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 WaplQ65Z40 1200 aaKnown RBP11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 SugctQ7TNE1 436 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Ms4a5Q810P8 197 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 GopcQ8BH60 463 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Erp44Q9D1Q6 406 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Sf3a3Q9D554 501 aaKnown RBP11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Adgrf5G5E8Q8 1348 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Cetn3O35648 167 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Nmt1O70310 496 aaKnown RBP11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Xirp1O70373 1129 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Wee1P47810 646 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Hsd17b1P51656 344 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Lrrcc1Q69ZB0 1026 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Foxo6Q70KY4 559 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Galnt17Q7TT15 598 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 HomezQ80W88 542 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Rufy1Q8BIJ7 712 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Chtf18Q8BIW9 969 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Fam187aQ9D3R5 417 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Styxl1Q9DAR2 321 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Capn12Q9ER56 720 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Arhgef7Q9ES28 862 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Ankrd2Q9WV06 328 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Pacsin2Q9WVE8 486 aaKnown RBP11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Myh14Q6URW6 2000 aa11.64□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Akr1b10G5E895 316 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Rasa2P58069 847 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Meis2P97367 477 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Muc3aQ3U5A2 218 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Gm5169Q5M8P2 212 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Atp13a4Q5XF90 1193 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Klra6Q60653 266 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Gas8Q60779 478 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Atp2b4Q6Q477 1205 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Trim47Q8C0E3 641 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 4921524L21RikQ9D5T2 438 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Zc3h7bF8VPP8 982 aaKnown RBP11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Tnfrsf11aO35305 625 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Kcnu1O54982 1121 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Serpinc1P32261 465 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Trim43aQ3TL54 445 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Hook2Q7TMK6 716 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Spata2Q8K004 515 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Ccdc80Q8R2G6 949 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Osbpl1aQ91XL9 950 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Sned1Q70E20 1403 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Btbd18A0A0A6YY25 723 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Gm4985A2ALC6 410 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Klhdc7aA2APT9 773 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Trove2O08848 538 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Il13ra2O88786 383 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Msh3P13705 1091 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 AdkP55264 361 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Gjb6P70689 261 aa11.63□□□□□ -0.55
Ptcd1-201ENSMUST00000031628 Zc3h18Q0P678 948 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms