RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Znf652Q5DU09 608 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fgfr1opQ66JX5 399 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tlr11Q6R5P0 926 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Rps6ka6Q7TPS0 764 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Rassf6Q80UQ2 353 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fgd5Q80UZ0 1219 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Dlg1Q811D0 905 aaKnown RBP13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Igdcc3Q8BQC3 813 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gjd4Q8BSD4 364 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Strip1Q8C079 837 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fam193aQ8CGI1 1231 aaKnown RBP13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 HibchQ8QZS1 385 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tmem143Q8VD26 458 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Senp2Q91ZX6 588 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Asic2Q925H0 512 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Erp44Q9D1Q6 406 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 IkbipQ9DBZ1 373 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Drg2Q9QXB9 364 aaKnown RBP13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Trim10Q9WUH5 489 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fam171a1A2ATK9 892 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Otud7bB2RUR8 840 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Olfr247E9PVJ7 320 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Olfr819K7N727 320 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ppef2O35385 757 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Nmt2O70311 529 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Eva1cP58659 440 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Dynll1P63168 89 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Atp8a1P70704 1164 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Pla2g4eQ50L42 875 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Cnot7Q60809 285 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Vil1Q62468 827 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gja3Q64448 417 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 NfrkbQ6PIJ4 1296 aaKnown RBP13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 DlatQ8BMF4 642 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 RalylQ8BTF8 293 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ccdc28aQ8CEI3 192 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Cdk9Q99J95 372 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Atp6v1e2Q9D593 226 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fam122aQ9DB52 284 aa13.13□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm382B1AXN3 1250 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Scgb2b7D3YYY1 112 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Pdk4O70571 412 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ftl1P29391 183 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Agbl1Q09M05 972 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Cep126Q0VBV7 1103 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Dok7Q18PE0 504 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Abl2Q4JIM5 1182 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Trpc6Q61143 930 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Pacsin1Q61644 441 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Kcnj11Q61743 390 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Klhdc10Q6PAR0 439 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Pip5kl1Q6U7H8 395 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tekt3Q6X6Z7 490 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ccp110Q7TSH4 1004 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 DcakdQ8BHC4 231 aaKnown RBP13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Naa25Q8BWZ3 972 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 AgpsQ8C0I1 645 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Rnf34Q99KR6 376 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ergic2Q9CR89 377 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ddah1Q9CWS0 285 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ccdc105Q9D4K7 499 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gpatch1Q9DBM1 930 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tacc3Q9JJ11 631 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ube4aE9Q735 1028 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 R3hdm1E9Q9Q2 1135 aaKnown RBP13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Pde8aO88502 823 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Myl3P09542 204 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ces1cP23953 554 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Klrb1Q0ZUP1 214 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 SkiQ60698 725 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Cc2d1bQ8BRN9 848 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fam228aQ8CDW1 299 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Actl9Q8CG27 415 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 AagabQ8R2R3 316 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Calml4Q91WQ9 153 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Cfap53Q9D439 514 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 4930449I24RikQ9D5E3 319 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Edf1Q9JMG1 148 aaKnown RBP13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 AdnpQ9Z103 1108 aaKnown RBP13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Peak1Q69Z38 1735 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ccdc88aQ5SNZ0 1873 aa13.12□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Znf536Q8K083 1302 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Casq2O09161 415 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Mmp15O54732 657 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Atp2a2O55143 1044 aaKnown RBP13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Cyp2b9P12790 491 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Irf6P97431 467 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Nlrp4cQ3TKR3 982 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Znf827Q505G8 1078 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Lrig2Q52KR2 1054 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ccpg1Q640L3 753 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Utp14bQ6EJB6 756 aaKnown RBP13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Atp2b4Q6Q477 1205 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Atxn2lQ7TQH0 1049 aaKnown RBP13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Lrrc15Q80X72 579 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Bola2Q8BGS2 86 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fbxl5Q8C2S5 690 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fermt3Q8K1B8 665 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Bbs7Q8K2G4 715 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Rell1Q8K2J7 272 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms